Caldilinea aerophila: CLDAP_10300
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Entry
CLDAP_10300 CDS
T01797
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cap
Caldilinea aerophila
Pathway
cap03030
DNA replication
cap03430
Mismatch repair
cap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLDAP_10300 (dnaE)
03430 Mismatch repair
CLDAP_10300 (dnaE)
03440 Homologous recombination
CLDAP_10300 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cap03032
]
CLDAP_10300 (dnaE)
03400 DNA repair and recombination proteins [BR:
cap03400
]
CLDAP_10300 (dnaE)
Enzymes [BR:
cap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLDAP_10300 (dnaE)
DNA replication proteins [BR:
cap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLDAP_10300 (dnaE)
DNA repair and recombination proteins [BR:
cap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLDAP_10300 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
tRNA_anti_2
T2SSK
NRDD
Motif
Other DBs
NCBI-ProteinID:
BAL99069
UniProt:
I0I1D2
LinkDB
All DBs
Position
complement(1287958..1292028)
Genome browser
AA seq
1356 aa
AA seq
DB search
MADDFVHLHVHSEYSLLDGLGRIKSLVKEAVKLGQPALALTDHGVMHGAIEFFRACREAS
IRPIIGIEAYQTVWGRPMTGRDPQLDRDNYHLLLLAKNMTGYRNLLKIATSSQLDGYYYK
PRIDHEFLAAHAEGLIASTGCLGAEVPQLLAQGKEREAYERLGWYVDVFGTENFFIELQE
HSIPELVQVNKILVPWAKKFGLNLVVTNDVHYVREEDGGPHDVLLCVQTGATIDQPNRMR
MSDGSYFLKSRAQMEATFRPFIDLPPSAFDHSLRIAEMCEVDLEDPTYHLPDLPIPEGFT
YETYLRHLTEEGLRRLYGDRADDPEVQERKERELRIIHEMGFDVYYLIVADLCNFARSRN
IWWNVRGSGAGSLVAYCIGITSIDPLKNNLIFERFLNPGRVTMPDFDLDFPDDQREEMIR
YTVQKYGESQVAQIATFNRMKAKAAVRDVGRAQGIELSKVDYIAKLIPGIPGKPVTIKDC
LTEGHEFYSQELVDLYNKEEWVRKLLDTAMQLEGVARNAGVHAAAVIVADRELTHYTPLM
RGSKSTVTSTIAQYEFPILESIGLLKVDFLGLSTLSVMREATRLIKERHGIEYTLQTIPY
EGEAAREAFKLLSSGEVSGVFQVESQGMRRVLTEMKPSTFEHIVAVISLYRPGPMEYIPS
FIRRMHGQEPVEYKHPMLEKILAETYGIIVYQEQIIQILSHLAGYTPGEADLLRRAIGKK
KASEIEKHKKIFIAGCEKNGIDPAIAAEIYADIEFFARYGFNKSHAADYAVITVQTAYLK
AHYPVEYMAAQLLVERDKTEKVVNFINECRRMGIDVLPPDVNYSGLDFEIQQRPADTPTL
AHRDPNLGYPFPVPEGSAIRFGMAAIKNVGEGPVRVIIKAREEGGPFKSLEDFCDRVDLR
QVNKRALECLIKAGALDRFGKRSQLLAVLDQMVSASAAVHDARESGQLSIFDMLGATREE
AHVSPIKLPDIEEVKGREKLQWEKELLGVYSISHPLHQLKIDFKRITTCSCAELDERYDG
KGVTLAGVITNVRVINTKKGDQMAFVQLEDLQGGCEVVFFPKTYAEYKEKLITDSVVIVK
GKAQTREGQTTLLADMVQTHIENYIGIDEEPPIPQVPLFHDMPPLNGVAPSIGGENDLDP
GMEAWEEPEINPFYNEPPQWTEDKGIEAVVFSPAMTANSSTIDAQRESEETQGQYSFQNG
VSSYSTENAVRPETEPKAEPVAPVVLATMKDKAEPSTHRSSTHRSSTNRSSTASAGGETT
QSSASTSTPRHRPVRRLLINFRRTGNLERDKYRLRELYEAVRDPKGRDAFVIRLLDNGRI
VELSFPNDGCTITEKLKTELQKHFRVEYEVEELPHA
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgattttgtgcatctgcatgtccattccgaatattcgctgttggacggtctg
gggcgtatcaagtctttagtcaaggaggcggtgaagctcggccagccagcgctggcgttg
accgaccacggcgtgatgcacggggccatcgagttcttccgcgcctgtcgcgaggccagc
atccgcccgatcattggcatcgaggcctatcagacggtgtggggccgaccgatgactggc
cgcgacccgcagctcgaccgcgacaactatcatctgctgctgctggccaaaaacatgacc
ggctaccgaaacctgctcaagatcgccacgtccagtcagctcgacggctattattacaag
ccacgcattgaccatgaatttcttgctgcccacgccgaagggctgatcgccagcaccggc
tgcctgggcgcggaggtgccccagctcctggcacaaggcaaagagcgcgaggcttatgaa
cggctgggctggtacgtcgatgtctttggcacagaaaattttttcatcgagctacaggag
cactcgatcccagagctggtacaggtcaacaaaattctcgtgccctgggcgaagaaattc
gggctgaacctggttgtcaccaacgacgtgcattacgtgcgcgaggaagatggcggcccc
catgacgtgttgctctgcgtgcagaccggcgccaccatcgaccaaccgaaccgcatgcgc
atgagcgacggcagctatttcctgaaaagccgggcgcagatggaggcaaccttccgcccc
tttatcgatctgccaccgagtgccttcgatcactcgctgcgcatcgccgaaatgtgcgaa
gtagacctcgaagacccaacctaccacctgcccgatctgcccatcccggaaggctttacc
tacgaaacctacctgcgccacctgacggaggaagggctgcgtcggctctacggcgaccgc
gctgacgatccagaggtgcaggaacgcaaggaacgcgagttacggatcatccacgaaatg
ggcttcgatgtctactacctgatcgtcgccgacctttgcaactttgcgcgcagccgcaac
atctggtggaacgtgcgcgggtcaggcgccggctcgctggtggcgtactgcatcggcatc
accagcatcgacccgctcaagaacaacctgatctttgaacgcttccttaaccccggccgt
gtcaccatgcccgactttgacctggactttcccgatgaccagcgcgaggagatgatccgc
tacaccgtgcaaaaatatggagaaagccaggttgcacagatcgccaccttcaaccgcatg
aaggccaaagctgcagtgcgcgatgtcggccgcgcccaaggcatcgaactttccaaggtc
gattacatcgccaagctcatccccggcattccgggcaaaccggtgacgatcaaggactgc
ctgacagaaggccatgaattttacagccaggaactggtcgatctctacaacaaggaagag
tgggtgcgtaagctgctcgacaccgccatgcagctcgaaggcgtggcacgcaacgccggc
gtacacgctgccgctgtgattgttgccgacagggagctgacccattacacgcccctcatg
cgcggcagcaaatcaaccgtcaccagcaccattgcccagtatgagttccccatcctggag
tcaatcggcctgctcaaggtggattttctggggctgagcacgctctcggtgatgcgtgaa
gcaactcggctgatcaaggagcgccacggcatcgaatatacgttacaaaccattccttac
gagggcgaggcggcccgcgaggcgttcaaactcctctccagcggcgaagtgagcggcgtc
ttccaggtagaaagtcagggcatgcgccgtgtgctcactgagatgaagccttcaactttc
gagcacatcgttgccgtgatctcgctctaccgccctgggccgatggaatacattccgtcc
ttcatccgccgcatgcatggtcaggagccggtcgagtataagcatccaatgcttgagaaa
attctggccgaaacctacgggatcatcgtctatcaggaacagatcattcagattttgagc
caccttgccggttatacgcctggcgaagccgacctgctgcgccgcgcaatcggcaagaaa
aaggcgtcggagattgaaaaacacaagaaaattttcattgccggctgtgaaaagaatggg
atcgatcccgcaattgccgcagaaatttatgcggatatagagttttttgcaagatatggt
tttaacaaatcacacgccgccgactacgctgtcatcaccgtgcagacggcttacctgaag
gcgcattatcccgtcgaatatatggcggcccagcttttggttgagcgcgacaagacggag
aaggtcgtcaatttcatcaatgagtgccggcgcatgggcattgatgtgctcccgcccgac
gtaaactattccggccttgatttcgagattcagcagcgccccgccgacacgccgacgctg
gcccaccgcgacccaaatcttggttaccccttccctgtgcccgaaggcagcgccatccgc
tttggcatggctgctatcaaaaacgtgggcgaagggccggtgcgcgtcatcatcaaggcg
cgtgaggaaggcggccctttcaaaagcctggaggatttctgcgatcgcgtcgacctgcgc
caggtcaacaagcgcgcgctggagtgcctgatcaaggcgggcgcgctcgaccgtttcggc
aaacgtagccagttgctcgccgtgctcgaccagatggtgagcgcatctgctgccgtccac
gacgcgcgcgagagtggccagctttcgatcttcgacatgctcggcgcaacaagagaggaa
gcacacgtctcgccgatcaaacttcctgacatcgaggaagtgaaaggccgggagaagctt
cagtgggagaaagagctgctcggcgtctactcgatcagccaccccttgcatcaactcaag
atcgatttcaaacgcatcaccacctgttcctgtgcagagttggacgaacgttacgacggc
aaaggtgtgacgttggcaggagttatcacaaacgtacgcgtcatcaacaccaaaaaaggt
gatcaaatggcgtttgtgcaactggaagatttgcagggcggctgcgaggtagtctttttc
cccaaaacctatgccgaatataaagagaagctcatcaccgattctgtggtcatcgtcaag
ggtaaggcacagacgcgcgaaggccagacgacgctgctggccgacatggtgcagacacat
atagaaaattacatcggcatcgatgaagaaccgccaattccgcaggtgcctctgtttcat
gatatgccgcctttgaatggtgtcgcaccatctatagggggcgaaaatgaccttgatcct
ggcatggaagcatgggaagagcctgaaataaaccccttctacaatgagccgccgcagtgg
acagaggataaggggatagaggccgtggttttctctcctgccatgacagcgaactcgtca
acgattgacgcccagcgtgaatcggaagagacgcagggtcaatacagtttccagaacggc
gtctcatcgtacagcacagaaaatgccgtccggccagaaactgagcctaaggcagagcct
gtcgcgcctgttgtgcttgccacaatgaaggacaaggcagagccatcaacgcacaggtcg
tcaacgcacaggtcgtcaacgaacaggtcgtcaacggcttctgccggcggtgagacgaca
cagtcttcagcctcaacgtctacgcccaggcatcgccctgtgcgccggctgttgatcaat
ttccgtcgcaccggcaaccttgagcgcgacaaatatcggctcagggaactatatgaagcc
gtacgagaccctaagggccgcgacgcgtttgtcattcgtcttctcgacaacggaaggatc
gtcgagttatcgtttcctaacgatggctgcacgatcactgaaaagctcaaaacggaatta
caaaaacactttcgggtcgaatatgaagttgaggagttgccccacgcatag
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integrated database retrieval system
