Caldilinea aerophila: CLDAP_14880
Help
Entry
CLDAP_14880 CDS
T01797
Symbol
holB
Name
(GenBank) DNA polymerase III delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
cap
Caldilinea aerophila
Pathway
cap03030
DNA replication
cap03430
Mismatch repair
cap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLDAP_14880 (holB)
03430 Mismatch repair
CLDAP_14880 (holB)
03440 Homologous recombination
CLDAP_14880 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cap03032
]
CLDAP_14880 (holB)
03400 DNA repair and recombination proteins [BR:
cap03400
]
CLDAP_14880 (holB)
Enzymes [BR:
cap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLDAP_14880 (holB)
DNA replication proteins [BR:
cap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLDAP_14880 (holB)
DNA repair and recombination proteins [BR:
cap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLDAP_14880 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNApol3-delta_C
AAA_22
NACHT
AAA_14
RNA_helicase
AAA_24
Motif
Other DBs
NCBI-ProteinID:
BAL99527
UniProt:
I0I2P0
LinkDB
All DBs
Position
1866871..1867944
Genome browser
AA seq
357 aa
AA seq
DB search
MTTSFSDLTPGEWPVYGHVWASRLLQWALRADPGGEDGSRLSHAYLFLGPPRIGKTTFAR
AFASALLCQDPARAPCHRCRACRLMASDSHPDFRLFQPVIKADKELVVDRQKGELRAEQA
EALIRDVSLRPMESGRKVILIQDIHLANATFANKILKTLEEPPPHVTLLVTARDRAEVLP
TIVSRCQVIELRPLDQTVIADALQRGWGASPTEAELLARLAGGRLGWAVEQVRNPVLREE
RMHHLETLWRLLAADRLERLRFAGELAAQRDNQRLFAMLEIWMSWWRDVLLAQMSQSEAC
SNIDQTHHILHHARSIASGAVCEYLSTLKQVEGYLRHTVNTRLALDVLMLKLPRLEA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgacgacttcattttctgacctgacaccgggcgagtggcctgtatatggccacgtgtgg
gcctctcgacttttgcaatgggctctgcgtgcagaccctggaggggaagacggttctcgc
ctcagccacgcgtacctttttctgggtcctcctcgaatcgggaagaccacttttgcgcgt
gcgtttgccagcgcgctgctctgccaggacccggcgcgcgctccctgtcatcgctgccgg
gcctgccgattgatggcatctgacagccatccggattttcgcctgtttcaaccggtgata
aaggccgacaaggagcttgtcgtcgacagacagaaaggcgagctgcgagccgaacaggcg
gaagcgctgattcgtgatgtctccttgcggccaatggaaagcggacgcaaagtcatcttg
attcaagacatccatctggcgaatgcaacctttgccaacaagattctcaaaacgttggag
gagcctcctccacatgtgacgttgcttgtgaccgcacgtgaccgcgctgaagtgctgccc
acgatcgtcagccgttgccaggtgatcgagctgcgcccgcttgaccaaactgtcatcgcc
gatgccttgcagcgcggatggggggcgtcaccgacggaggcggagctcctggcgcgactt
gccggcggtcgcctggggtgggcagtcgaacaggttcgcaatccggtcctgcgtgaagag
cgcatgcaccacctggagacgctctggcggctgcttgccgccgaccgccttgagcggctg
cgcttcgccggcgagctggctgcgcagcgagacaatcagcgtctgtttgccatgcttgaa
atctggatgagttggtggcgcgatgttttgctggcgcaaatgtcgcaaagcgaggcttgc
agcaacatcgaccagacgcatcacatcttgcaccatgccaggagcatcgcttcgggtgcg
gtttgcgagtacctatcaaccctgaaacaggtcgaaggctatctgcgccacacagtcaat
acgcggctcgctttggacgttttgatgctcaaattgccgaggctggaagcgtga
DBGET
integrated database retrieval system
