Caldilinea aerophila: CLDAP_16810
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Entry
CLDAP_16810 CDS
T01797
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cap
Caldilinea aerophila
Brite
KEGG Orthology (KO) [BR:
cap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cap03009
]
CLDAP_16810 (rimO)
Enzymes [BR:
cap01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CLDAP_16810 (rimO)
Ribosome biogenesis [BR:
cap03009
]
Prokaryotic type
ribosomal protein modification factors
CLDAP_16810 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
BAL99720
UniProt:
I0I383
LinkDB
All DBs
Position
2122118..2123587
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AA seq
489 aa
AA seq
DB search
MDSDGIEMLLRGARYRPADRPQDADVLIVNTCGFLEAAKEESIGVLQELSRRKRKHQILV
AAGCLVQRNSAEVLDRVPKVDGLLGTRRWMEVLELIALIRHGKERRRLERYALLGESEVS
GIEFLGPQQAPALLGDPATDFVAAMPRPPVVAGSAYLKISEGCNAPCAFCTIPSFKGKLR
SRPLEAIVDEAVALVQAGAKELVIVAQDTTDYGRDRGEPNSLPRLLSAICNRTDDRLRWV
RLMYAYPGHVSDELIEVMADQPKIVPYLDMPLQHGDPRTLRRMRRPSRLEMVYDHIEKLR
RAMPDIALRTTFIVGYPGETEEEFTGLLDFVRAIEFDKVGAFPFSPEPGTPAAELPDQVD
DEVKQERYARLMEVQQPISLRKNQAQVGRLLDVLVEGEGRVEGSGEPLLLARSYRDAPEI
DGLVLIPGVRGVAPGEMMQVLINGAMEYDLIGEPLVSETFSSKRLLSNRQLAPIRFEEEE
KDETAARPG
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
gtggacagtgacggcatcgagatgctgctgcggggcgcgcggtatcgccccgcggaccga
ccgcaggacgccgacgtgctgatcgtgaacacctgcggttttctggaggcggctaaagag
gagtcgatcggtgtcttgcaggagctgagccgacgcaagcgcaagcaccagattttggtt
gcagccggttgtctcgtacagcgcaacagcgctgaagttctcgatcgtgtaccgaaggtc
gatggtctgttaggcacgcgacgctggatggaggtactggagctgattgcgctgatccgc
cacggcaaagagcggcgtcggcttgagcgttacgccctgctcggtgaatcagaagtctct
ggcattgagtttttaggcccgcagcaggcgcctgcgctgttgggcgatccggccaccgac
tttgtcgcagcgatgccgcggccgcctgtcgtcgctggcagcgcctacctgaagatttcg
gagggctgcaatgcaccctgcgccttttgcacgatcccctcattcaaaggcaagttacgc
agtcggccgctcgaagcgatcgtggatgaagcagtcgccctggtgcaggccggcgcaaaa
gagctggtcatcgttgcacaggacaccaccgattacggccgcgatcgaggggagccgaac
agcctgccccgcctgctgtccgccatctgcaatcgtacagacgaccggctgcgctgggtg
cggctgatgtacgcctaccccggccacgtcagcgacgagctgatcgaagtaatggccgat
cagccgaagatcgttccctatctcgacatgccgctgcagcatggcgacccgcgcaccctg
cgccgtatgcgccgtccaagtcggctggagatggtctacgaccatatcgagaagctgcgc
cgcgccatgccagacattgccctgcgcaccaccttcattgtagggtatcctggagagacc
gaagaagaattcacggggctgctggatttcgtgcgcgccatcgagttcgacaaagtgggc
gctttccccttcagcccagagccagggacgccggcggcagagctacccgatcaggtggac
gacgaagtgaaacaggagcgctacgcacggctgatggaggtgcaacagccgatcagcctg
cgcaagaatcaggcgcaggtcggcaggttgctcgatgtgctggtggagggcgaaggtcgg
gtcgaaggcagcggcgagccgctgctgttggcgcgctcctatcgcgatgcaccggagatc
gacggattggtactcattcctggggtgcgcggtgtggcgccaggcgagatgatgcaggtg
ctgatcaacggcgccatggagtacgacctgatcggagagccgctggtgagtgaaacgttt
tcaagcaaacggttgctttcaaacaggcagttggcgccgatccggtttgaggaggaagaa
aaggacgagacagccgcccgcccagggtga
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