Caldilinea aerophila: CLDAP_18860
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Entry
CLDAP_18860 CDS
T01797
Name
(GenBank) putative pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
cap
Caldilinea aerophila
Brite
KEGG Orthology (KO) [BR:
cap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cap03009
]
CLDAP_18860
Enzymes [BR:
cap01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
CLDAP_18860
Ribosome biogenesis [BR:
cap03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CLDAP_18860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BAL99925
UniProt:
I0I3T8
LinkDB
All DBs
Position
2363275..2364165
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AA seq
296 aa
AA seq
DB search
MTDQIVTDQFVVQGLPAPQRLDRILRARYPHSGRQAIQQLIGQRQVEVNGRTVWLASWLV
ANGDVITLHRAPATLPSHPQRFDPTWLIADEGDLLAVNKPAGLLSEPRRGLDRPSLLQLA
TAHFGPLTLAHRLDRDTSGLVLLTRGGEVNVLLARAFQEGLVHKEYIAVVAAPNRLQQSG
VIDVRLRPSQRRRDQMEPTERGGQRAITRYEVIAVAADRAWVRLFPETGRMHQLRVHLAY
LGAPILGDRLYGSAHSASRLMLHAHLITLPAQIFGVERRFVAPLPPDFTPNQTPDS
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatcagatcgtgaccgatcagtttgtcgtgcagggcctgcctgcaccgcaacgc
ctggaccgtatcctgcgcgcccgctatcctcacagcgggcgccaggccattcaacagctt
atcggccagcgccaggtagaggtcaacgggcgtacggtatggctggcctcctggcttgtc
gccaacggcgacgttatcaccctacaccgggcaccggctacgctgccttcccatccccaa
cgctttgatcccacatggctcatcgccgacgaaggcgatctgttggcagtgaacaaaccg
gccggtctgctctccgagccgaggcgtggcctggatcgcccatctttgttgcaactggcc
acagcgcacttcggcccactcacgcttgcccatcgcctcgatcgcgatacatccggcctg
gtgctgttgacgcgcgggggcgaggttaacgtgctgcttgcgcgcgccttccaggaaggg
ctggttcataaggagtatatcgccgtcgtcgctgcaccgaatcgcctccagcagagcggt
gtgatcgacgtgcgcctgcgccccagccagcgtcgccgcgaccagatggagccaacggag
cgaggtggacagcgcgccatcacccgttatgaggtgatcgccgttgccgcggaccgcgcc
tgggtgcgcctgttcccagaaacaggacgcatgcatcaactacgcgtgcatctggcctac
ctcggtgcgccgatcctgggcgaccgtctctacggctcagcgcactctgcttcccggttg
atgttgcacgcccatctcatcaccctgcccgcacagatcttcggcgtcgaacgtcgattt
gttgcgccgttgccgccggactttacgccaaaccaaacacctgactcatga
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