Caldilinea aerophila: CLDAP_19690
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Entry
CLDAP_19690 CDS
T01797
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
cap
Caldilinea aerophila
Pathway
cap03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLDAP_19690 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cap03400
]
CLDAP_19690 (uvrB)
DNA repair and recombination proteins [BR:
cap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLDAP_19690 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CLDAP_19690 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
DUF87
AAA_30
Kinesin
AAA_22
AAA_16
Microtub_bd
SWI2_SNF2
AAA_5
SRP54
TrwB_AAD_bind
Cas3-like_C_2
YfjL_C
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BAM00009
UniProt:
I0I421
LinkDB
All DBs
Position
2466136..2468163
Genome browser
AA seq
675 aa
AA seq
DB search
MPPFQVISEFKPTGDQPQAIAKLVEGIRKGMKHQVLLGVTGSGKTYTMAKVIEAVQKPTL
IMAHNKTLAAQLYAEMREFLPNNAVEYFVSYYDYYQPEAYIPRTDTYIEKDAQINEEIDR
LRLAATSALFSRRDVVIVASVSCIYGLGSPQDYGRVVLHLRVGDMVRRNQVLRHLVEIYY
DRNDNFLQRGRFRVRGDVLEVQPADRETAYRISLWGDEIERISEFDPLTGELIADHQQVD
IFPAKHFVTPQDRLEAAIEEIQREMEEQVALFKAQGKLLEAQRIQQRTNYDIEMLREVGY
CNGIENYSRPLAGRPPGSTPWTLLDYFPPDWLLIVDESHMTIPQVRGMYNGDRARKEVLV
NYGFRLPSALDNRPLTFEEFEEHLNQVIYVSATPGPYEKAKAEQIVEQVIRPTGLVDPVV
EVRPTKGQIDDLLREIKMRVAKGQRALVTTLTKRMAEDLTEYLAELGVKVHYLHSEIHTI
DRVEILRDLRLGVYDVVVGINLLREGLDLPEVSLVAILDADKEGFLRSESSLIQTIGRAA
RHVEGKAILYADVITDSMRRAIDETNRRRAIQEAYNREHGITPQSIVKGIRDLTDRVRVM
AESKATYKVEAGLEAQTTIDVDPEHLSPEDLAKLIKSIEQEMKQAAKALEFERAAALRDQ
LVELRRIEVERKVMA
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgccaccatttcaggtgatcagtgaattcaaaccgaccggcgatcagccacaggcgatc
gcaaaactggtcgagggcatccgtaaagggatgaagcatcaggtgctgttgggtgtgacc
ggcagcggcaagacgtacaccatggcgaaggtgatcgaggcggtgcagaagccgactttg
atcatggcacacaacaagacgctcgccgcccaactgtatgccgaaatgcgcgagtttttg
cccaacaacgcggtcgaatatttcgtttcctactacgactactaccagccggaggcatac
attccgcgtacggacacctacatcgagaaggacgcccagatcaacgaagagatcgatcgc
ctgcgcctggctgccaccagcgcgctcttcagccgccgcgacgtggtgatcgtggcctcg
gtctcctgcatctacggcctgggcagcccgcaggattatggtcgcgtcgtgttacatctg
cgcgtgggcgacatggtgcgccgcaatcaggtgctgcgccatctggtcgaaatttattac
gaccgcaacgacaacttcctgcagcgcgggcgcttccgcgtgcgaggagacgtgctggag
gtgcagcctgcggaccgcgagacagcctaccgcatcagcttgtggggcgatgagatcgag
cggatcagcgagttcgaccccctaaccggcgagctgatcgccgatcatcagcaggtggat
atcttcccagccaagcactttgtcacgccgcaggatcgtctggaggccgcaattgaggag
attcagagagaaatggaggagcaggtcgcccttttcaaggcccagggcaaactgctcgaa
gcgcagcgcatccagcaacgcaccaactacgacatcgagatgctgcgcgaggttggctat
tgcaacggcatcgaaaactacagccgcccgctggcaggacgcccgcctggctccacaccc
tggacgctgctggattacttcccgccggattggctgctgattgtggacgaaagccacatg
accattccgcaggtgcgcggcatgtacaacggcgaccgcgcgcgcaaggaggtactcgtc
aactatggctttcggctgcccagcgcgctggataaccggccgctcaccttcgaggagttc
gaggagcacctgaaccaggtgatctatgtcagcgccacgcctggcccttacgagaaagcc
aaggctgaacagatcgtggagcaggtgatccgcccaaccggtcttgtcgatccggtcgtt
gaggtgcggccgacgaaagggcagatcgacgatttgttgcgcgagatcaaaatgcgcgtc
gccaaagggcagcgcgccctggtgacgacactcaccaagcgcatggccgaggatctgacc
gaatatctcgccgagctgggcgtcaaggtgcattatctgcacagcgagattcacaccatt
gaccgcgttgaaattctgcgtgacttacgcctcggcgtctacgacgtcgtcgtcggcatc
aacctgctgcgcgaggggctggacctgccggaggtgtcgctggtggcgatcctcgacgca
gacaaagagggctttctgcgcagcgaaagctcactcatccagaccatcggtcgcgccgcc
cgccatgtcgagggaaaggccatcctctacgccgacgtcatcaccgactcgatgcgtcgc
gccatcgacgagaccaaccgacgccgtgctatccaggaagcgtacaaccgcgagcacggc
atcacgccgcagagcatcgtcaaaggcatccgcgatctcaccgaccgcgtgcgcgtgatg
gcggagagcaaggcgacatataaggtggaggctggtctcgaggcgcagacgaccatcgac
gttgatccggagcatctctcgcccgaagacctggcgaagctgatcaagtcgatcgagcaa
gagatgaaacaggcggccaaagcgctggagtttgagcgcgcggctgcgctacgcgatcag
ttggtggagctgcgccgcatcgaggtagagcgaaaagtgatggcatga
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integrated database retrieval system
