Caldilinea aerophila: CLDAP_21320
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Entry
CLDAP_21320 CDS
T01797
Symbol
holA
Name
(GenBank) DNA polymerase III delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cap
Caldilinea aerophila
Pathway
cap03030
DNA replication
cap03430
Mismatch repair
cap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLDAP_21320 (holA)
03430 Mismatch repair
CLDAP_21320 (holA)
03440 Homologous recombination
CLDAP_21320 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cap03032
]
CLDAP_21320 (holA)
03400 DNA repair and recombination proteins [BR:
cap03400
]
CLDAP_21320 (holA)
Enzymes [BR:
cap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLDAP_21320 (holA)
DNA replication proteins [BR:
cap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLDAP_21320 (holA)
DNA repair and recombination proteins [BR:
cap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLDAP_21320 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DUF1319
DNA_pol3_delta
CENP-T_C
Hda_lid
T2SSG
Motif
Other DBs
NCBI-ProteinID:
BAM00172
UniProt:
I0I4I4
LinkDB
All DBs
Position
2668167..2669231
Genome browser
AA seq
354 aa
AA seq
DB search
MIYLLLDADEYLAAEWLAEQKAKLGDPELASLNTVELQGAQTSAAAVLGEAAMMPFLTSH
RLVIVRGLLEAYEKRMAASKTPGAAVYVEAAQLLEGLYHIPESCILVFVDNSVDKRRALW
KGYRLPAAGNQPERRIDGLEALIQAGVVQVEALATPDVKTLPAWLQRRARQRGVAIDGGA
VALLCNFVGPNLRQLDNELEKLSLYAGRRPITQQDVRALVADASEEMIWNLTDALAQRHP
AQAVRALYDLRRNDQNPIYILTMIARQYRMLIEVKSLLAAGVSDPYDIARRLGYAPYPVQ
KALQWSHQYTFAELEAILERLLEVDMAMKTGADQDTELDLLTAELCMQRRQRAE
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgatttatctcttgctcgacgcggacgaatatctggctgccgaatggttggcagaacag
aaggcaaagttaggcgacccagagctggccagcctcaacacggtggagctgcagggggcg
cagaccagcgccgccgctgtgttgggggaggctgcgatgatgccgtttctgaccagccat
cgcctggttatcgtacgcgggttgctcgaagcctacgagaagcgcatggccgccagcaag
acgcctggcgctgctgtgtacgtcgaggcggcgcagcttctcgaaggactgtatcatata
ccggagtcgtgcatccttgtctttgtggataactctgtggataagcgtcgcgcgctgtgg
aaaggctatcggttacccgccgctggcaatcagccggagcgccgcatcgatggactggag
gcattgatccaggcgggggtggtgcaggtggaagcgctggcgacgcctgacgtcaagact
ttgcccgcctggctgcaacgccgtgcccgccagcgaggggtcgccatcgacggcggcgct
gttgccctgctctgcaacttcgtcggccccaacctgcgccagcttgacaacgagctggag
aagctttccctctacgcaggaaggcgccctatcacgcaacaggatgtgcgcgccctggtc
gccgacgccagcgaggagatgatctggaatctgaccgacgcgttggcgcagcgtcaccct
gctcaagccgtgcgcgcgctgtacgacctgcggcgcaacgaccaaaaccccatctacatc
ctcaccatgattgcccgtcaatatcgcatgttgatcgaggtcaagagtctcctggccgcc
ggcgtcagcgatccttacgacattgccaggcgactgggctacgcgccgtatccggtgcaa
aaagcgctgcagtggagccatcagtacactttcgccgagctggaggcgatcctcgaacgg
ctgctggaagtcgacatggcgatgaagaccggcgctgaccaggacacggaactcgatctg
ttgacggcggagctgtgcatgcagcgccgccagcgagcggaataa
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