Caldilinea aerophila: CLDAP_22220
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Entry
CLDAP_22220 CDS
T01797
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cap
Caldilinea aerophila
Pathway
cap03030
DNA replication
cap03410
Base excision repair
cap03420
Nucleotide excision repair
cap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLDAP_22220 (polA)
03410 Base excision repair
CLDAP_22220 (polA)
03420 Nucleotide excision repair
CLDAP_22220 (polA)
03440 Homologous recombination
CLDAP_22220 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cap03032
]
CLDAP_22220 (polA)
03400 DNA repair and recombination proteins [BR:
cap03400
]
CLDAP_22220 (polA)
Enzymes [BR:
cap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLDAP_22220 (polA)
DNA replication proteins [BR:
cap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CLDAP_22220 (polA)
DNA repair and recombination proteins [BR:
cap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CLDAP_22220 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLDAP_22220 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
Motif
Other DBs
NCBI-ProteinID:
BAM00262
UniProt:
I0I4S4
LinkDB
All DBs
Position
complement(2772004..2774871)
Genome browser
AA seq
955 aa
AA seq
DB search
MPGRVVSASIVAPPRNGASTMALLLLIDGHSQAYRAYFGIKTPLSTRAGEPTSAVYGFTR
KLLAALRDYHPDCIAVAFDAGDTWRHAEFPDYKATRDVMPDDMRTQMERIESLLRAFNIP
IITYPNFEADDVLGTLARKAAAQGHDVLVMTGDRDMFQLVDERVKILYTSGGPNPVTSVY
GIEQIQERYGLTPQQFIDFKALTGDSSDNIPGVPGVGEKTAIKLLQQYGSIEGIYEHLDE
IGGPKLRQALSDAREQVMRNRRLVTIHTDLDISFDLAQCAVHDYNPDAVLELFNELEFRS
LLKELPASTRNAAEALATEPQQAGQMTLFSAAPTPLTSLTIDGERTVLIVQDRTTLAQLV
ESLRAAERLSFDVETTATDAMQAALVGLGIAWAPGQTAYIPVTHTIGEQLDWSHAMEAIR
PFFADAALPKVAHNAKYDLIVLRRHGLDVMGVLDDTLLMAWLLDPASRSLGLKALAETEL
GWKMTELSELIGSGRKQITIDQVPLEQAAAYCGADVDATIRLYATLEPRLREAGLEELYR
TIERPLLPVLTAMEMAGVLLDVEFLKQMSAELSKRLYELEQSLYEVVGHAFNLRSTQQLS
QVLFDEMGFPSKGLKKTASGHYSTAADVLETLAAYGDVLSPTQQRLIELILEHRQLEKLR
STYVDALPALVNPQTGRVHTSFSQTGAVTGRLSSSNPNLQNIPIRTEIGREIRRAIVAPP
GWQLISADYSQVELRVLAHMANEPLLIEAFQADQDIHAVTASKLFGVPVEAVTRDQRSLG
KTINFATIYGVSEFGLSSRTELTREQARQFLEQYFQTYPRIRAFLDHILEEAREKGYVQT
LLGRKRFFPELKSGKLPPNQRAAVERAAINAPIQGTAADIMKIAMIRLYERLQNDGYRTR
LLIQVHDELVLEAPPEELESATHLVRETMANAYQLTVPLKVDVEIGPNWRDMTKA
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgccaggccgcgtcgtgagtgcatcgattgttgcgccgcccagaaacggagcatccacc
atggcgcttctgctgttgatcgacggacattctcaggcctatcgcgcctacttcggcatt
aagacgccgctctccacgcgtgcaggtgaaccgaccagcgcagtgtacggcttcacgcgc
aagctgcttgccgcgctgcgcgactatcatcccgactgcatcgccgttgcctttgacgcc
ggcgatacctggcgccatgccgaatttccggattataaggcgacgcgcgatgtgatgcct
gacgacatgcgcacgcagatggagcgcatcgagagcctgctgcgcgccttcaatatcccg
atcatcacctatcccaactttgaagccgacgacgtgctgggcactctggcacgcaaggca
gcggcacaggggcacgatgtcctggtaatgaccggcgatcgcgatatgtttcaactggtg
gacgaacgggtgaaaatcctctacacatcaggcggaccgaaccccgtcacgtcggtctat
ggcattgaacagattcaggagcgctacggccttacgccgcagcaatttatcgacttcaaa
gcgctgacgggcgattcatccgacaacattccgggggtccccggcgtaggcgaaaagact
gccatcaaacttttgcagcaatacggctcgatcgagggcatctatgaacatctggatgag
atcggcggccccaagttgcgccaggcgctgagcgacgcgcgcgaacaggtcatgcgcaat
cgtcgcctggtcaccattcacaccgatctcgatatctccttcgaccttgcgcaatgtgcc
gtgcatgattacaaccctgacgctgtgctcgaactgttcaacgagcttgagttccgtagc
ctgctcaaagagttgccagcctccacgcgcaacgcagcagaggccctcgccaccgaacca
cagcaggccggtcagatgacacttttcagcgcagcgccgacaccgctcacgagcctgacc
attgatggcgagcgcaccgtcctgattgtgcaggacagaacaacgctggcacagctcgtc
gagtcgctgcgcgcagcggaacgactctccttcgacgtagagacgactgccaccgatgcc
atgcaggctgcgctggtagggctaggcattgcctgggcgccagggcagacggcctatatt
ccggtgactcataccataggagaacaactcgactggtcgcatgcgatggaagcgattcgc
ccgttcttcgccgacgctgcgctgcccaaggtcgctcacaacgccaaatacgatctgatc
gtcctgcgacgccatggcctcgatgtcatgggcgtgctcgatgataccctcctgatggcc
tggctgctcgacccggccagccgctcgctcggcctcaaggcgctggcggagacagagctg
ggctggaagatgaccgagctgagcgagctgatcggcagcggacgcaaacagatcacgatc
gatcaagttcctctcgagcaggcggcggcctactgcggcgccgacgtggatgctaccatc
cgcctgtatgcaacgcttgagccgcggctgcgcgaagccgggctcgaagagctctatcgc
accatcgaacggccgctgctgccagtgctcaccgccatggaaatggcaggcgtgttgctg
gacgtcgaatttctaaaacagatgtccgctgagctttcaaaacgactatacgaattagag
caatctctatacgaagtcgtcggccatgcgttcaatctgcgcagcacgcagcaactcagc
caggtcctctttgatgaaatgggcttcccttcaaaaggactgaaaaagacggcctccggc
cactacagcacggcggccgacgtgctcgaaaccctggccgcctacggcgatgtgctctca
ccgacgcaacagcgcctcatcgagctgatcctggagcatcgccagcttgaaaagctacgc
agcacctacgtcgatgccctccctgcactggtcaacccgcagacaggccgcgtgcacacc
agcttcagccagacaggcgccgtcaccgggcgactcagcagcagcaacccgaacctgcaa
aacatcccgatccgcacggagatcggccgcgaaattcgccgcgccatcgtcgccccacct
ggctggcagttgatttcagcggactacagccaggttgaattgcgcgtgctggcccacatg
gcaaatgaaccgctgttgatcgaggcgtttcaggcagaccaggacatccatgccgtcacc
gcctccaaactctttggcgtcccggtcgaggcggtcacacgcgaccagcgcagcctgggc
aaaacgatcaacttcgccaccatctacggcgtcagcgaattcggcctgagcagccgcacc
gaattgacgcgggaacaggcacgccagtttctcgagcaatacttccagacctatccgcgg
atccgcgccttcctcgatcacatcctggaggaagcacgggaaaaaggatacgtgcagacg
ctattggggcgcaaacgcttctttcccgaactaaaaagcggaaagctgcctcccaaccag
cgcgcagcggtcgaacgcgccgccatcaacgcgccgatccagggcacggctgccgacatc
atgaaaatcgctatgattcgactatacgaacgactgcaaaacgacggctatcgcacacgg
ctgctgatccaggtgcacgacgaactggtgctggaagcgccgcccgaggagctggaaagc
gcaacgcatctcgtgcgcgagacgatggccaacgcctaccaactgaccgtgccgctgaaa
gtagatgtggagatcggcccaaactggagagacatgaccaaagcctga
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