Caldilinea aerophila: CLDAP_22340
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Entry
CLDAP_22340 CDS
T01797
Name
(GenBank) putative ABC transporter
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cap
Caldilinea aerophila
Pathway
cap02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CLDAP_22340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cap02000
]
CLDAP_22340
Transporters [BR:
cap02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CLDAP_22340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_membrane_3
AAA_16
AAA_29
nSTAND1
AAA_23
DUF87
CspB_prodomain
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
BAM00274
UniProt:
I0I4T6
LinkDB
All DBs
Position
complement(2788401..2790311)
Genome browser
AA seq
636 aa
AA seq
DB search
MTAGPQTSRQARPGFKNLGRAIAYLGRYRGVAIAAYAALLLSIGAQLLVPQLVQNILDAV
VRGMLAHQLAQAPAAIQAAALSQAGMSAAELQAILANPLTPLYWAIALILVMAVVRGLFA
FAQAYLSEKAGQNIAFDFRNELFAKIQRLSFSYHDRNRTGQLMIRATDDVEKVRLFIGQG
LLMAVQALVLLTGALAMLLVTNFQLTLVVLPILPLALVMFMIFGAITQPLFIKVQQKLST
LNTILQENLAGIKVVKAFATEAQEQKRFAAAADDLMHQQIYVARLFSFLFPVIFLIANLG
QAAVLYFGGSQIIAGTLTIGEWQKFSLYLVFVFFPLGQLGFIISQMSQAAASANRIFEIL
DAPNEVTDKPGAIPLPPIRGEVVFDHVSFRYFGSSELVLDDVSFRAEPGQTVAILGATGS
GKSSIINLIPRFYDVTSGRVLIDGYDVRDVTIESLRRQIGIVLQETNLFTGTIRDNIAFG
RPDASDEEVIAAAKAAAAHDFIMSFPAGYDTPVGERGTTLSGGQKQRIAIARALLLNPRI
LILDDSTSAVDVQTELQIQQALDRLMKGRTSFVIAQRISTVVNADKILVLEKGRIVAEGT
HAELIENSPVYAEIYRSQLVEDPTVEPADKELELIL
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcaggtccacaaacttcccggcaggcgcggcctggcttcaagaatctcggccgc
gctatcgcctatttagggcgttaccgcggggtagccattgctgcctatgcggcgctgttg
ttgagcatcggcgcgcagttgttggtgccgcaactggtgcaaaacatcctcgacgctgtc
gtgcgcggcatgctggcccatcagcttgcccaggcaccggccgccatacaggcagcagcg
ctcagtcaggcgggcatgagcgctgccgagctgcaggctattctcgccaacccgcttact
ccactctactgggcgattgcgctgattctggtgatggcagtcgtgcgagggttgtttgca
tttgcacaggcctatctctcggaaaaggccggacaaaacatcgccttcgactttcgcaac
gaactcttcgccaaaattcagcgcctttccttcagctatcacgatcgcaaccgcaccggt
cagttgatgatccgcgccaccgacgatgtggaaaaggtgcgcctgttcatcggtcagggt
ctgctgatggcggtgcaggcgctcgtgctgttgaccggtgcgctggccatgctgttggtg
acaaactttcagcttacgctggttgtgctgccgatcctgccgcttgcgctcgtgatgttc
atgatcttcggcgccatcacgcagccgctcttcatcaaagttcagcagaagctatcgacg
ctcaacaccattctgcaggagaacctggcaggcatcaaggttgttaaagcctttgccacc
gaagcgcaggagcagaagcgcttcgctgcggccgctgacgatctgatgcatcagcagatt
tacgttgcgcgtctcttcagctttctcttcccagtcatctttctcattgcgaatctgggg
caggccgctgtactctacttcggcggctcgcaaatcatcgccggcacattgaccatcggc
gaatggcaaaaattcagcctctaccttgtctttgtcttctttccattggggcagctcggt
ttcatcatctcgcagatgagccaggctgccgccagcgccaaccgcatctttgagattctc
gatgcacccaacgaagtgaccgataaaccaggtgcaattccgctgccgccgatccgaggg
gaggtcgttttcgaccatgtctcgttccgctacttcggaagttctgagctggtgctggac
gatgtaagtttccgcgccgagccggggcagacggtcgccattctgggcgcgaccggcagc
ggcaaaagcagcatcatcaacctgatcccccgcttttacgacgtcacttccggccgtgtg
ctgatcgacggctacgatgtacgcgacgtcacgatcgaatccctgcgccgacagatcggc
atcgtgttgcaggaaacgaatcttttcacaggcaccattcgcgacaacatcgcctttggc
cgacccgacgccagcgacgaggaagtgatcgctgcagccaaagccgcggccgcacacgat
ttcatcatgagctttcccgcaggctacgacaccccggtgggcgaacgagggacaactcta
agcggcggacaaaaacaacgcatcgccatcgctcgcgcgctgctgctgaacccacgcatc
ctgatcctggacgattcgaccagcgcagtcgacgtgcagaccgagctgcaaattcaacag
gcgctcgatcggttgatgaaaggccgcaccagctttgtgatcgctcagcgcatcagcacg
gtggtgaacgccgacaaaatcctggtgctggagaaaggtcgcatcgttgccgaaggaacg
cacgccgagctgattgaaaacagccctgtttacgccgaaatctatcgcagccaactggtc
gaagacccaactgttgagcctgcagacaaagaactggagttgatcctatga
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