Caldilinea aerophila: CLDAP_23420
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Entry
CLDAP_23420 CDS
T01797
Symbol
nfo
Name
(GenBank) endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
cap
Caldilinea aerophila
Pathway
cap03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CLDAP_23420 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cap03400
]
CLDAP_23420 (nfo)
Enzymes [BR:
cap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
CLDAP_23420 (nfo)
DNA repair and recombination proteins [BR:
cap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CLDAP_23420 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-ProteinID:
BAM00382
UniProt:
I0I544
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All DBs
Position
2924368..2925294
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AA seq
308 aa
AA seq
DB search
MSVLLLGAHMSIAGGVSYALDRAASVHSNAVQVFTKNNRQWVGPPINEADIERWRVQKPA
LGIVYAVSHASYLINLASPKDDLWEKSRLAHQDELVRAHAYGIPHVVLHPGSHTGAGEQA
GIRRIAEALNRIHEETPDCTDTLTCLEIMAGQGSVLGRKLDELRAVIDLVEDRSRVGVCL
DTCHAFAAGYDIRTPEGYAAFMREVDRWLGVETVKVWHFNDSKGTLGSNVDRHVHIGEGE
IGEEGFRHILNDPRWDGIAMLLETPKDDTLAEDAMNLARLCALVEDVERIPPGLRSTLSE
GSNEKRGS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttcttcttttaggcgcccatatgtcgattgcgggcggcgttagctatgcgttg
gatcgggctgcctcggtgcacagcaacgcggtgcaggtcttcaccaaaaacaatcgccaa
tgggttggcccacctattaacgaagcagatatcgagcgttggcgcgtgcagaagccagcg
ctcggtatcgtttacgcagtgagccacgccagctatctgatcaatcttgccagccctaaa
gatgatctgtgggagaaaagtcgactggcacatcaagatgagctggtgcgcgcccacgcc
tatggtatcccacacgttgtgttacatcccggctcgcacaccggcgctggcgagcaggcc
ggcatccgacgcatcgccgaagcgctcaatcgtattcatgaagagacgcccgactgcaca
gacacgctcacctgtctggagattatggcagggcagggcagcgtgctcggccggaaactc
gatgagctgcgcgccgtcatcgacctggtggaggatcgttcccgcgtcggcgtctgtctg
gatacctgtcacgcctttgcagcgggctacgacatccgcacgccagaaggttatgcagcc
tttatgcgtgaggtggatcgctggttaggggtggagacggtgaaggtctggcacttcaac
gacagcaaaggcacgcttgggagcaatgtcgatcgccacgtacacatcggcgaaggcgag
atcggtgaagaagggttccgacacatcctcaatgacccacgttgggatggtatcgccatg
ctgctggagacgcccaaagacgacacgctggcggaggatgccatgaatctggcgcgactt
tgcgccctggttgaggacgtcgaacgcatcccgcctggcctgcgcagcacccttagtgag
ggatcgaacgagaaaagaggttcataa
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