Caldilinea aerophila: CLDAP_25700
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Entry
CLDAP_25700 CDS
T01797
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
cap
Caldilinea aerophila
Pathway
cap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CLDAP_25700 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cap03400
]
CLDAP_25700 (xseA)
Enzymes [BR:
cap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CLDAP_25700 (xseA)
DNA repair and recombination proteins [BR:
cap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CLDAP_25700 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
HrpF
Motif
Other DBs
NCBI-ProteinID:
BAM00610
UniProt:
I0I5S2
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All DBs
Position
3202967..3204178
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AA seq
403 aa
AA seq
DB search
MLLTVSKLTTRIVQLFEQDDLLRDVQVIGEVSNWRRAASGHIYFRLKDEGATINAVMWKS
HALAQSWLPKEGDQVIAHGYVGVYPESGAYQLYTNRLTPAGRGYLYAQFEALKERLRAAG
LFDEARKRPLPQLPARLAIVTSPDAAALRDILRTLTARWPLVEVILFPTLVQGIDAPQRI
AAAIAAANRYSNEVAPIDVLILARGGGSIEDLWAFNDEQVAIAVAQSAIPVISGVGHETD
FTIVDFVADLRAATPTAAAVAAVQGRLDHHAQVMARMHTLHRRIRQRLDQERRTFERLLM
RLQRIHPQRQLDQARLRLDERERRLHWAVQRALAQRGERLRAAEQRLEALNLLRVLARGY
SIVQRMDGSVVTDPAMVHTGELLTVRSAGGEYRVEVKGEEASQ
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgactgtctcgaaactcaccacccgcattgttcaactgttcgagcaagacgat
ctgttgcgcgacgtgcaggtgatcggcgaggtgagcaattggcgccgcgcggccagcggc
catatctactttcgactcaaagacgaaggcgccaccatcaatgcagtcatgtggaaaagc
catgctctggcgcaaagctggttgccgaaggagggcgaccaggtgattgcgcatgggtac
gtcggcgtctatccggaaagcggtgcctatcagctctataccaatcgcctgacgcctgct
ggccggggatatttatacgcccagttcgaggccttgaaagagcggttgcgcgcggccggc
ctgtttgacgaggcgcgcaaacgccctttgccccaattgcctgcacggctcgccattgtg
accagtccggacgccgccgcgctgcgtgatattctgcgcacgctcaccgcgcgctggccg
ctggtggaggtgatcctttttccgacgttggtccagggcatcgacgcaccgcagcgcatt
gccgccgccatcgccgccgccaatcgctacagcaacgaggtggcgcccatcgatgtgctg
attctggcgcgcgggggcggcagcatcgaagacttatgggcgttcaatgatgagcaggtg
gcgatcgccgtcgcccaaagcgccatcccggtgatttccggcgtgggtcatgagaccgat
ttcaccatcgtcgattttgttgccgacctgcgcgcggcgacgcccacggcggcggctgtg
gccgccgtgcagggccgacttgatcatcatgcacaggtgatggcgcgcatgcatacgctg
catcgacgcatccggcagcgccttgatcaggagcggcgaacttttgaacgcctgttgatg
cgcctgcagcgcatccatccccagcgccagctcgaccaggcgcggctgcggctcgatgag
cgcgagcgtcggctccattgggctgtgcagcgggcgctcgcgcagcggggggaacgcctg
cgcgcagcggagcagcggcttgaggcgctcaaccttttgcgggtgctggcccgtggctac
agcatcgtgcagcgtatggacggcagcgtcgtcaccgacccggcgatggtgcacacgggg
gagctgctgaccgtccgctccgcaggcggcgagtaccgcgtggaggtgaaaggagaggaa
gccagtcaataa
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