Caldilinea aerophila: CLDAP_29110
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Entry
CLDAP_29110 CDS
T01797
Symbol
miaB
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
cap
Caldilinea aerophila
Brite
KEGG Orthology (KO) [BR:
cap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cap03016
]
CLDAP_29110 (miaB)
Enzymes [BR:
cap01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
CLDAP_29110 (miaB)
Transfer RNA biogenesis [BR:
cap03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
CLDAP_29110 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-ProteinID:
BAM00951
UniProt:
I0I6R3
LinkDB
All DBs
Position
complement(3615603..3617201)
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AA seq
532 aa
AA seq
DB search
MSNQFDRGLRAPGDAHETVTYEFATDRNSTAARKYHIWTIGCQMNVADSNHVAAELEKLG
YGPTDRLEEANVVVLNTCVVRQSAEDKAIGKLGSLKPWKKAHPDRVIALMGCMVGVKPSP
QLIESYPFVDVFMPPSEATPLVNFLRRAEIDAEMAEIERQQLARRYQLQDEAQPIGATQS
IRHLALSGEAPVAAYVPVVYGCSHACTFCIIPFRRGVERSRPAQEIVNEVRGLVAQGVRE
VTLLGQIVDRYGYDWRGELGNSATVRAFHGNGNDSSASASHSDGHHAYDLADLLRAVHEI
EGLWRIRFLTSHPNYMTDRILQAVRDLPKVCPHIEVPIQAGDDEVLERMKRGYTNAEYRA
LIERIRATVPDVAINTDIIVGFCGETEEQFERTVEIVRDLRFDKVHLARYSPRPGTVSER
RMVDDVPEAEKVRRHKLLEALQEQISAEINRGYLGEIVEVLVEDRHKGKWRGRNRQNKLV
FIESDLPLRGRLVEAQITWTGPWSMQGRFVRDVSPLPDKVTAPRQTFTIALA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcaatttgatcgcggtttgcgtgcgcccggcgacgcgcacgagaccgtcacc
tacgagttcgctaccgaccgcaattccactgcagcccgcaaatatcatatctggacgatc
ggctgtcagatgaatgtggccgactcgaatcatgttgccgctgagctggaaaagcttggc
tatgggccaaccgaccggctcgaggaggccaatgtcgttgtgctcaacacctgtgtggtg
cgccagagcgccgaggataaggcgatcggcaaactgggcagcctcaagccctggaagaag
gcacatccggatcgcgtgattgcgttgatgggctgtatggtcggcgtcaagcccagccca
cagctcatcgaaagctatccgttcgtcgacgtcttcatgccgcccagcgaagcaacgccg
ttggtaaatttcctgcgccgggctgaaatcgacgccgaaatggcggaaatcgaacgtcag
caactggcgcgccgctatcagcttcaggatgaggcacagccgatcggcgccacacagtcg
atcaggcaccttgctctcagtggggaggcgcccgtcgccgcctacgtgccggtcgtctac
ggctgtagccacgcctgcaccttctgcatcattccattccgccgcggggtagagcgcagc
cgaccggcgcaggagatcgtcaacgaggtgcgcggcctggttgcccagggcgtgcgcgag
gtgacgctgctgggtcagattgttgaccgttacggctacgactggcgcggggagctgggc
aacagcgccacggtcagggcatttcacggcaatggcaacgactcgagtgcttctgcatcg
cactccgatggccatcatgcctatgatttggccgacctgctgcgcgccgtgcatgaaatc
gaagggctgtggcgcatccgcttcctgaccagccatcccaattacatgacggaccgcatc
ctgcaggccgtgcgtgacctccctaaggtctgcccgcacatcgaggtgcccatccaggcg
ggcgacgatgaagtgctcgagcggatgaagcgcggctacaccaatgccgagtaccgtgcc
ctgatcgagcgcatccgcgccacggtgccggatgttgccatcaacaccgacatcatcgtc
ggcttctgcggcgagacggaggagcagttcgagcgcaccgtcgagatcgtgcgcgatctc
cgcttcgacaaagtgcacctggcgcgctacagccctcgcccgggcacggtcagcgagcgc
cgcatggtggacgacgtgccggaggcggagaaggtgcgccggcacaagctgctggaagcg
ctccaggagcagatcagcgccgagatcaatcgaggctatctgggtgaaatcgtcgaagtg
ctggtggaagacaggcacaaaggcaaatggcgcggtcgcaaccgccagaacaagcttgtc
tttatcgaaagcgacctgccgctgcgcgggcgtctggtggaagcgcagatcacatggacg
gggccgtggtcgatgcaggggcgcttcgtacgcgatgtgtctccgctgcccgacaaagtc
acagccccgcggcagaccttcacgatcgccctggcgtag
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