Caldilinea aerophila: CLDAP_29280
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Entry
CLDAP_29280 CDS
T01797
Name
(GenBank) putative pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
cap
Caldilinea aerophila
Brite
KEGG Orthology (KO) [BR:
cap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cap03009
]
CLDAP_29280
Enzymes [BR:
cap01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
CLDAP_29280
Ribosome biogenesis [BR:
cap03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CLDAP_29280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF3024
Exc
Motif
Other DBs
NCBI-ProteinID:
BAM00968
UniProt:
I0I6T0
LinkDB
All DBs
Position
complement(3634129..3635106)
Genome browser
AA seq
325 aa
AA seq
DB search
MQKVSHAIFQVEDDAGQRIDRWLADRMPERSRSEIQRWIRQGLVRIEGRPVKPGQRIEPG
QQITVEIPPSPVETTLAPEAIALNIVYEDDDLLVIDKPAGMVVHPSPGHASGTLVHAVLH
HCPQIEGVGGEQRPGIVHRLDKDTSGLIVVAKHDYAHRFLQAQFKDRTVYKQYLALVEGR
LTPSRGRINAPIGRHPTHHTRQVVLPPDALSGTSAGREAVTDYEVLAVYAAPLQGAGNAV
ATFSLVRAEPHTGRTHQIRVHFAWLQHPVVGDVLYGFKRQRLLLKRHFLHAHKLRLRLPR
DGELHEFTSPLPPDLQAVLDQLQKL
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagtaagtcacgcaatatttcaggtcgaggacgatgctggtcaacgcatcgac
cgctggctggcggatcgtatgccggagcgcagccgcagcgaaatccagcgctggattcgc
cagggacttgtacgcattgagggtcggccggtcaagccaggccaacgcatcgagccgggt
cagcagatcacggttgaaatcccgccctctccagttgaaacgacgctcgctcccgaagcc
attgcactcaacattgtctacgaagacgacgatctgctggttatcgacaagcctgccggc
atggtcgttcatccttcgcctggacatgccagcggtactctggtacacgcggtgctccac
cactgccctcagattgaaggtgtcggcggcgagcagcgccccggcatcgtccatcggctc
gacaaggatacctccggcctgatcgttgttgcaaaacatgactatgcgcatcgtttctta
caggcgcagttcaaagatcgcaccgtctacaagcagtatctggcgctggtcgaaggccgc
ctgaccccttcccgcggccgcatcaatgcaccgatcggccggcaccccacccatcacacg
cgccaggtggtgctgccgcccgacgccctttccggcacatcagccggacgcgaggccgtc
accgattatgaggtgctggccgtctatgctgcgccgcttcagggtgccggtaacgccgtc
gccaccttctcgctcgtgcgcgccgaaccacataccggccgcacgcatcagatccgcgtc
catttcgcctggctccaacatccggtggtaggagacgttctctatggattcaagcgacaa
cggctcctgttgaaacgccactttttgcatgcacataagctgcggctgcgccttccgaga
gacggcgagctgcatgagtttacatcgccgctgccgccggatcttcaggctgtgctggat
caattgcagaagctgtga
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integrated database retrieval system
