Caldilinea aerophila: CLDAP_33970
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Entry
CLDAP_33970 CDS
T01797
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cap
Caldilinea aerophila
Pathway
cap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLDAP_33970 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cap03019
]
CLDAP_33970 (groL)
03110 Chaperones and folding catalysts [BR:
cap03110
]
CLDAP_33970 (groL)
03029 Mitochondrial biogenesis [BR:
cap03029
]
CLDAP_33970 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cap04147
]
CLDAP_33970 (groL)
Enzymes [BR:
cap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CLDAP_33970 (groL)
Messenger RNA biogenesis [BR:
cap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CLDAP_33970 (groL)
Chaperones and folding catalysts [BR:
cap03110
]
Heat shock proteins
HSP60 / Chaperonin
CLDAP_33970 (groL)
Mitochondrial biogenesis [BR:
cap03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CLDAP_33970 (groL)
Exosome [BR:
cap04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CLDAP_33970 (groL)
Exosomal proteins of other body fluids (saliva and urine)
CLDAP_33970 (groL)
Exosomal proteins of breast cancer cells
CLDAP_33970 (groL)
Exosomal proteins of colorectal cancer cells
CLDAP_33970 (groL)
Exosomal proteins of bladder cancer cells
CLDAP_33970 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF2866
Motif
Other DBs
NCBI-ProteinID:
BAM01437
UniProt:
I0I849
LinkDB
All DBs
Position
4231390..4233018
Genome browser
AA seq
542 aa
AA seq
DB search
MRRPGIAFQPEARSQFHAGITMLADMVAATLGPHRGPVLHYEGTRRIVEALDDAATALRR
IISLGRPDLDVGAMLARHVIWRLEQQVGDGGATALVLMRALVDEGARQISAGFNAMRLTE
GMRRGAAVAVEALRRQSQRIDGERNLAAVARTVVQDDDLAALLGEMSYLLGADGHIQLES
YVAPYLERQYLGGAHYGAEIASMYFYTEMERRRSVLVAPAVALLDKPLNEAAQAIALLEA
TIRAGRKALLIVAPDTSGPALNLLVANQMQPAEKRKVTILAVKLRAVGDERRFALQDLAA
ITGAAVLGEIGERTARDARPEDLGRAQRAEFSEKNLVVTMEGARRAFIQEQIADLSRRLA
MLPYDDEERPILVRRLAALTGGIGVLKIGAYHQPEREMRRAQAERAWKVLSAVHRGGVVA
GGGAALLHCRHAVLEAATRESDAECASGMRIVANALSAPQRQMLCNAGVSAPALILDRVA
EQGPPMTYDVLKGEIVDAQRAGLLDATDVVAAILQAAVSGATMALSTDAIVYHRKPQQSF
TP
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
gtgcggcgtccagggatcgcattccaacccgaagcgcgcagccagtttcatgcaggcatc
accatgctggccgacatggtggcggcaacgcttggcccccatcgcgggccggtgcttcac
tacgaaggcacgcgacgcatcgtggaagcgctcgacgacgcagccaccgccctgcgccgc
atcatcagcctgggacggcccgacctcgacgtcggcgccatgctggcgcgccacgtgatc
tggcggctcgaacagcaggtgggcgacggcggtgcaacggcactggtattgatgcgagcg
ctggtcgacgaaggtgcccgccaaatctccgccggtttcaacgccatgcgcctgaccgag
gggatgcgccggggcgcagccgttgccgtcgaggcgctgcgccgccaaagccagcggatc
gacggcgaacgcaatctggccgccgttgcgcgtacagttgttcaggacgacgacctggct
gccctgctcggcgagatgagctacctgctcggcgcagacggccacatccagcttgaatcc
tacgttgcgccctatctggagcggcaatatctgggcggtgcgcactacggcgccgaaatc
gccagcatgtacttctacaccgaaatggagcgacgccgcagcgtgctcgttgcgccagcg
gtcgccctcctcgacaagcccctcaatgaagctgcacaggcgatcgctctgctcgaagca
acgattcgcgcagggcgcaaggcacttctgatcgttgcgcccgatacctctggcccggcc
ctgaacctgctggtcgccaatcagatgcaacctgcggaaaagcgcaaggtgaccatcctg
gcggttaagctgagggcggtcggcgatgaacgccgctttgcgctgcaggacctcgctgcg
ataaccggcgccgctgttctgggtgaaatcggcgagcgcacggccagagacgcccgaccg
gaagatttaggccgcgcccagcgcgccgaattctccgagaaaaacctcgtcgtcacgatg
gagggcgcgcgacgggcgttcattcaggagcagatcgccgatctcagccgtcggctggcc
atgctgccctatgacgacgaagagcgtcccatcctggtgcggcggctggccgcgttgacc
ggcggcatcggtgtgttaaagatcggtgcctaccatcaacccgaacgcgagatgcgccgc
gctcaggcggaacgcgcctggaaagtgctctccgcggtccaccggggtggggtcgtggcg
ggcggtggcgccgcgctgttgcattgccgccacgcagtgctggaagcggccacgcgagaa
agcgacgcagagtgcgcctccggcatgcgcatcgtagccaatgcgctgagtgcgccgcaa
cgacagatgctgtgcaacgctggcgtctctgcaccggccctcatccttgaccgggtggcg
gagcagggtccgccaatgacctatgatgtgctcaaaggagaaattgtggatgcgcaacgc
gccggtttactcgacgccaccgacgttgtggcggcgatcttacaggctgcagtcagcggc
gcgaccatggcgttgagcaccgacgcgatcgtctatcaccgcaagcctcagcagagtttt
acaccgtag
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