Caldilinea aerophila: CLDAP_35260
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Entry
CLDAP_35260 CDS
T01797
Name
(GenBank) putative ABC transporter
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cap
Caldilinea aerophila
Pathway
cap02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CLDAP_35260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cap02000
]
CLDAP_35260
Transporters [BR:
cap02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CLDAP_35260
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
AAA_21
AAA_16
Zeta_toxin
SMC_N
AAA_30
TsaE
SbcC_Walker_B
AAA_29
AAA
AAA_5
DUF87
RsgA_GTPase
MMR_HSR1
AAA_15
ABC_membrane_3
Motif
Other DBs
NCBI-ProteinID:
BAM01566
UniProt:
I0I8H8
LinkDB
All DBs
Position
complement(4402049..4403920)
Genome browser
AA seq
623 aa
AA seq
DB search
MTHATIPWKRPQDTPEARQRREAKIARLLHGGDDDVLGKAYDGRLVARLFRYVSPYRRQT
VMAVILMGVSTVLSVSGPWFVGHAVDSVAAGDLGALRLWTLIFAAAAIAEWFTNRQRVHI
MAFVGTRVITDLRSQLFRHLHSLSLNFHNNMSVGRLMSRLIGDVGVLQEFITWSITGLTR
STFNLLGISLAMIFLEWRLALTAFALLPLMVLLTNYWRRHVRDAYRATRQRLSIINGFLN
ESIAGVRVTRSFNQEQRSFWHFDDLNRSFFDANVRATRLSAIFFPGVDFLGSLAAALVVG
VGGWLVMRETLSAGVLVAFVLYVERFFDPIRELAQRYNTFQATMASSERVFSLLDTPPDL
TDAPDAVDIGPIAGRVDFEHVFFRYKDNEPVLEDITIHAEPGQRIALVGETGAGKSTVIR
LLARFFDVTDGAVLVDGHDVRRVTLASLRSQMGIVLQDPFLFSATIADNIRYGRLDATDE
EVMAAAKAVGAHDFIMALPEGYATRVEENGSNLSAGQRQILAFARALIANPRILILDEAT
SNVDTATEQIIQRAMDTLMAGRTSFVIAHRLSTIVNADRIIVMERGRIVEQGSHQELLAR
RGHYYRLYTMQWQRQSKTEINRA
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacgcaacgattccctggaaacgaccgcaggatacgccagaggcgcggcaacgc
cgcgaggcgaaaattgcccgcttgctccacggcggcgacgatgacgtgctgggcaaagcc
tacgatggccggctggtggcacgactctttcgctacgtgagtccctatcgtcgacagacc
gtcatggcggtgattttgatgggtgtctcgacagtgctctccgtaagcgggccgtggttc
gtcggccacgccgtggacagcgtggccgcgggcgatctcggcgccttacgcctgtggaca
ttgattttcgccgccgcagcgatcgccgaatggttcaccaaccgccagcgcgtgcatatt
atggcgtttgtcggcacgcgcgtcatcaccgacctgcgcagccagctcttccgtcatctg
cacagcctctcgctgaacttccacaacaacatgagcgtgggaaggctgatgagccggctg
atcggcgacgtgggcgtcttgcaggagttcatcacctggtcaataacggggttgacgcgc
tcgacgttcaacctgctgggaatttcgctggcaatgatctttttagagtggcggctggcg
ttgacagcttttgctttgttgccgctgatggtgctgttgaccaactactggcgcagacat
gtgcgtgacgcctatcgcgccacgcggcagcggctgtcgatcatcaacggctttctcaac
gaatcgatcgccggcgtgcgcgtcacgcgcagcttcaaccaggaacagcgcagcttctgg
catttcgacgacctgaaccgctcctttttcgacgccaacgtgcgcgccacccggctttcc
gccatctttttcccgggcgttgattttctcggatcgctggcggcggcgttggtggtgggc
gtgggtggctggctggtgatgcgcgagacgctcagcgccggcgtgctggtggcgttcgtg
ctctatgtcgagcgattctttgatccgatccgcgagctggcgcaacgctacaacaccttc
caggccacgatggcatcgagcgagcgtgtcttttcgctgctcgatacaccgcctgatctg
accgacgcgcccgacgctgtggacatcggcccgatcgcagggcgcgtcgatttcgagcat
gtttttttccgctacaaagacaacgagccggtgttggaagatatcacgattcacgccgag
ccaggtcagcggattgcactcgttggggaaactggcgcaggtaagagcaccgtcattcgc
ctcctggcgcgctttttcgacgtcaccgatggggcagtgttggtggatggccatgatgtg
cgccgtgtcacgctcgccagcctgcgttcccagatgggtattgtgttgcaagaccccttc
ctcttcagcgccaccattgccgacaacattcgctatgggcggctggatgccaccgacgaa
gaagtgatggcggctgccaaagctgtcggtgcacatgacttcatcatggcgttgccggaa
ggctatgccacgcgcgtcgaggagaacggcagcaacctcagcgccggccagcggcagatt
ctcgccttcgcccgcgccctgatcgccaatccgcgcatcctgattctggacgaagcgacc
agcaacgtggatactgctaccgagcagatcatccagcgcgccatggacacgcttatggct
ggtcgcaccagctttgtcattgcgcatcgcctgagcacgatcgtcaatgccgaccggatc
attgtgatggagcgtggccgcatcgtcgagcagggcagccatcaggaattgctggccagg
cgcggccattactatcgcctctacaccatgcagtggcaacgccagagcaaaacagagatc
aacagagcatga
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