Caldilinea aerophila: CLDAP_35270
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Entry
CLDAP_35270 CDS
T01797
Name
(GenBank) putative ABC transporter
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cap
Caldilinea aerophila
Pathway
cap02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CLDAP_35270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cap02000
]
CLDAP_35270
Transporters [BR:
cap02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CLDAP_35270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_16
AAA_29
SMC_N
Zeta_toxin
AAA_22
DUF3325
AAA_25
RsgA_GTPase
DUF87
AAA_23
AAA_33
AAA_24
Motif
Other DBs
NCBI-ProteinID:
BAM01567
UniProt:
I0I8H9
LinkDB
All DBs
Position
complement(4403939..4405693)
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AA seq
584 aa
AA seq
DB search
MSGRLAVYRRLFAYLRPYAGQMMLAYGAMLGATLLNLFVPQVIKEAIDQGLAQRNGQVLF
FAAALILGIAVVRGGAGFLQRYWGEWLTHRVAYDLRNDYYIALQRLPFSFYDRSHTGDLM
SRATGDISETERFAGIGLLELAGVLLLLLGVVVSMFVVDWALALLALLPVLSLVALGLRF
GVVVRPMFQRIQEQLGLLSTVMQESMTGIGVVKAFAREPYEFEKFDTISDEWFRRRMGVI
RTWGDYWPLFTFVLAVGVFLMLWFGGPLAMEGAISVGSLFAMISYLLMLNGPAQQLGNLV
NLAATAGASAQRVFEIIDTPVEIKEAPNAIELNEIEGHVAFDHVSFAYEGSDRVLHDIHF
EAPAGKTIALVGPTGSGKSTLVSLLPRFYDPTAGCVRIDGIDIRTVTLRSLRRHIGMVLQ
EPFLFSTTIRENIAYGVENAAEEAIIAAAKAANAHEFIMRFPDGYDTRVGERGVTLSGGQ
RQRIAIARALLYDPKILILDDSLSSVDTQTEHLIQQALATLMRNRTTFIIAQRLVTLKNA
DCIYVLDAGRIVECGTHAELVSREGLYRKIYELQLKAQESALDM
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcagactggcagtctatcgccggctgtttgcctacttgcgcccctacgcgggg
cagatgatgcttgcttacggcgccatgttgggcgcaaccctgctgaatctctttgtgccg
caggtaatcaaagaagccatcgatcaggggttggcacagcgtaatgggcaggtgctcttc
ttcgccgccgcactcattctgggtattgcagtcgtgcgcggcggagccggctttctgcaa
cgctattggggcgagtggttaacgcatcgcgtcgcctatgatctgcgcaatgactattac
attgcgttgcaacgccttccattcagtttctatgaccgttcccacaccggcgacctgatg
agtcgcgccactggcgacatttcggagacggagcgttttgccgggattggcctgctggag
ctggcgggcgttctgctgctgctgctgggtgtggtggtttcgatgttcgtggtggattgg
gcgctggcgctcctggcgttgctgccggtgctgtcgctggtggcgttggggctgcgcttc
ggcgttgtggtgcgcccgatgttccagcgtattcaggagcagctcggcctgctttcgacc
gtgatgcaggaaagtatgaccggcatcggcgtcgtcaaggccttcgcccgcgagccttat
gaatttgaaaaattcgacaccatcagcgacgaatggttccgtcggcgcatgggtgtgatt
cgtacctggggcgactactggccacttttcaccttcgtgctggcggtcggcgtttttttg
atgctctggttcggtggcccgctggcgatggaaggcgccatcagcgtcggctcgcttttt
gccatgatttcctatctccttatgctgaacgggccagcgcagcagctcggcaacctggtt
aacctggcggcgacggcaggtgccagtgcccagcgcgtcttcgagatcatcgacacgcct
gtggagatcaaggaggcacccaacgccatcgaactcaacgaaatcgaaggtcatgttgct
tttgatcacgtctcctttgcctacgagggctccgatcgcgtgctacacgacattcacttt
gaggcgcctgcaggcaagacgattgcacttgttgggccgaccggctcgggcaagtcgacg
ttggtctcccttttgccccggttctatgatccgactgccggctgtgtgcggatcgatggc
atcgacatccgcaccgtgacgcttcgcagcctgcgccgtcacatcggcatggtcctgcaa
gagccttttctcttcagcacgacaattcgggaaaacatcgcctacggcgttgaaaatgcc
gccgaagaggcgatcatcgccgctgcaaaagctgcaaacgcccatgaattcatcatgcgc
tttcccgatggctacgacacgcgcgtcggcgagcgcggggtgacactcagcggcgggcag
cgtcaacgcatcgcgattgcacgggcgctgctctacgatcccaaaattctcatcctggat
gactcgctgagcagcgtggatacacaaaccgagcacctgatccaacaggcgctggcgacg
ctcatgcgcaatcgcaccacctttatcattgcgcagcggctggtcacactcaaaaacgcc
gactgcatctatgtgctcgatgccggtcgcatcgtggaatgtgggacgcacgcggagctg
gtgagccgagaggggctgtatcgaaagatctacgaactgcaattgaaggcgcaggaaagc
gccctggacatgtaa
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