Caldilinea aerophila: CLDAP_37840
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Entry
CLDAP_37840 CDS
T01797
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
cap
Caldilinea aerophila
Pathway
cap02024
Quorum sensing
cap03060
Protein export
cap03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CLDAP_37840 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CLDAP_37840 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CLDAP_37840 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cap02044
]
CLDAP_37840 (ffh)
Enzymes [BR:
cap01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
CLDAP_37840 (ffh)
Secretion system [BR:
cap02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CLDAP_37840 (ffh)
Eukaryotic Sec-SRP protein
CLDAP_37840 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
AAA_22
MeaB
ArsA_ATPase
AAA_33
CbiA
AAA_30
nSTAND3
AAA_31
ParA
NACHT
AAA_16
AAA_17
cobW
Ploopntkinase3
ResIII
AAA_25
APS_kinase
KAP_NTPase
MMR_HSR1
nSTAND_NTPase7
ATPase
AAA_24
ABC_tran
Thymidylate_kin
AAA_19
MobB
AAA_18
NPHP3_N
Fe-ADH
SLFN-g3_helicase
Mg_chelatase
DO-GTPase1
CBP_BcsQ
AAA_14
6PF2K
TsaE
AAA
AAA_28
Motif
Other DBs
NCBI-ProteinID:
BAM01824
UniProt:
I0I986
LinkDB
All DBs
Position
complement(4737339..4738730)
Genome browser
AA seq
463 aa
AA seq
DB search
MFESLTDKLQSIFDKLATKGKLSEADVNAAMREVRLALLEADVNYKVVKEFVERVKARAV
GAEVMQSLTPAQQVVKIVHEELIELLGKPAPLNTSGPPPHVIMLVGLQGAGKTTMAAKLA
LRLKKNGQRPLLVAADIYRPAAIKQLEVLGAQIEVPVYSAGTQTPASTIAKDALKLAREK
AYNVVIIDTAGRLQIDEALMQELEQVRLVTRPSDILLVVDAMTGQEAVNVAEGFNARVPL
TGLIMTKIDGDARGGAALSVRQVTGVPIKFLGTGEKLPDLEPFDPERLAGRILGMGDVLT
LIERAQENISADAAAAMEKRLVEGQFDFEDFLEQLKQVKRLGPLTEILSMIPGLNRFAKE
IDPTMAQDSLKKTEAIINSMTIQERRNPDILNASRRRRIAAGSGTTVQDVNTLVKQFREM
QKMMKQLGVMGGNKKQKGKKGRGLPHQRGGMLPSGLSDLFGGR
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgaaagcttaaccgataaactgcaaagcatcttcgacaaattagccaccaaaggc
aagttgtccgaagccgacgtcaacgccgccatgcgcgaggtgcgcctggcgctgctggag
gcggacgtcaactacaaagtggtcaaagagttcgtcgaacgcgtcaaggcgcgtgcggtg
ggcgccgaggtgatgcagagcctgacgccggcgcaacaggtcgtcaagatcgtgcacgag
gagttgatcgagctgctcggcaagccggcgccgctgaacacgtcggggccgccccctcac
gtgatcatgctggtcggcctgcagggcgccggcaagacgacgatggcggccaagctggcg
ctgcgcctcaagaagaatggtcaacggccgctgctggtcgccgccgacatttatcgaccg
gcggccattaaacagcttgaagtcctgggtgcgcagatcgaggtccccgtctatagcgca
ggtacgcagacgcccgcctcgacgatcgccaaggacgcactgaaactggcgcgtgagaaa
gcctataacgtcgtgatcattgacaccgccggccgcctgcagatcgacgaagcgctgatg
caggagctggagcaggtgcggcttgtgacacggccttctgacattttgctcgtcgtagat
gccatgaccggtcaggaggcagtcaacgttgccgaaggcttcaacgcgcgcgtgccgctg
accggcctgatcatgaccaagatcgacggtgatgcacgcggcggcgccgcattgagcgtg
cgccaggtcaccggcgtgccgatcaagttcctgggcacaggcgaaaaattgcccgacctc
gaaccctttgatccggagcgattggctggccgtattttgggcatgggcgatgtattgacg
ctgattgaacgcgcccaggaaaacatcagcgccgacgccgccgcggcgatggaaaagcgg
ctggtcgaaggccagttcgatttcgaggactttctggagcagctcaaacaggtgaagcgg
ctcggcccgctgaccgagattctgtccatgattccaggcctgaatcggttcgccaaagaa
atcgatccgacgatggcacaagacagcctcaaaaagaccgaggcgatcattaacagcatg
acgatccaggagcgacgcaacccggacatcctcaatgccagtcgacgccgacgcattgcg
gcaggcagcggaacgactgtccaggatgtcaacacgcttgtgaaacagttccgtgaaatg
caaaaaatgatgaaacaactgggcgtcatgggcggcaacaagaaacagaaagggaaaaaa
ggtcgcggcctgcctcatcagcgaggcgggatgctcccttccggtttgagcgatctcttc
ggaggacgttag
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