Capnocytophaga sp. ARDL2: AB4865_00590
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Entry
AB4865_00590 CDS
T11520
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
capa Capnocytophaga sp. ARDL2
Pathway
capa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
capa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AB4865_00590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
capa03021
]
AB4865_00590
03400 DNA repair and recombination proteins [BR:
capa03400
]
AB4865_00590
Enzymes [BR:
capa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AB4865_00590
Transcription machinery [BR:
capa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AB4865_00590
DNA repair and recombination proteins [BR:
capa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AB4865_00590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Cohesin_HEAT
Fungal_KA1
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
XFA55600
LinkDB
All DBs
Position
complement(117262..118254)
Genome browser
AA seq
330 aa
AA seq
DB search
MAIFNFQKPDKVIMIDSTDFNGKFEFRPLEPGYGLTIGNALRRVLLSSLEGYAITSIRIE
GVEHEFSTIAGVVEDVTEIILNLKQVRFKRQIEDAENESVSVSFTGKKQLTAGDFQKFIS
GFQVLNPDLVILNCEDKINLSLEFTIEKGRGYVPAEENRKPNAPIGTIFTDSIYTPVKNV
KYAVENYRVEQKTDYEKLVFDIVTDGSIHPKDALTEAAKTLIHHFMLFSDERITLEADEI
AQTDSYDEESLHMRQLLKSRLVDLDLSVRALNCLKAAEVETLGDLVSFNKNDLMKFRNFG
KKSLTELEELVQNKGLTFGMDLSKYKLDKE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaatatttaattttcaaaagcccgataaagttattatgattgattctactgatttt
aacggtaaattcgaatttcgtccgttagaaccaggttatggattgacaatcggtaacgca
ttacgaagagtattactttcttctttagaggggtatgcaatcacttctattcgtatcgaa
ggcgttgaacatgagttttctactattgccggtgttgttgaagatgtaacagaaatcatc
ctaaatctaaaacaagtgcgtttcaaacgccaaatcgaagatgcggaaaacgaatctgtt
agtgtttcatttactggtaaaaaacaattaactgcgggtgatttccaaaaatttatttca
ggatttcaagtattaaatccagacttagtaatcttaaattgcgaagataaaatcaatctt
tctcttgagtttactatcgaaaagggtagaggatatgttccagcagaagaaaatagaaaa
ccaaatgctccaatcggaacaatttttacagattctatttacacgcctgtaaaaaatgtg
aagtatgcggtagaaaactatcgtgtagagcaaaaaacagactacgaaaaattagttttc
gatatcgtaacagacggatctattcatcctaaagacgctttgacagaagcagcaaaaact
ttaattcaccactttatgttgttttcagatgagagaattacattagaagcagacgaaatc
gctcaaacagactcttatgacgaagaatcacttcatatgagacaattgttgaaatctcgt
ttggtggatttagacttatcagttcgtgcattgaactgtttgaaagctgctgaagttgaa
acattaggagacttagtatcttttaacaaaaacgatttgatgaagttcagaaacttcggt
aaaaaatctttgacagaattagaagaactagttcaaaataaaggtttgactttcggaatg
gacttgtcaaaatataaattagataaagaataa
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