Capnocytophaga sp. ARDL2: AB4865_08150
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Entry
AB4865_08150 CDS
T11520
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
capa Capnocytophaga sp. ARDL2
Pathway
capa03030
DNA replication
capa03430
Mismatch repair
capa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
capa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB4865_08150
03430 Mismatch repair
AB4865_08150
03440 Homologous recombination
AB4865_08150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
capa03032
]
AB4865_08150
03400 DNA repair and recombination proteins [BR:
capa03400
]
AB4865_08150
Enzymes [BR:
capa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB4865_08150
DNA replication proteins [BR:
capa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AB4865_08150
DNA repair and recombination proteins [BR:
capa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AB4865_08150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
DNA_pol_A_exo1
GIY-YIG
RNase_H_2
MA3
MciZ
Motif
Other DBs
NCBI-ProteinID:
XFA54673
LinkDB
All DBs
Position
1605147..1606388
Genome browser
AA seq
413 aa
AA seq
DB search
MYAIIDLETTGGKFNEEGITEIAIYRFDGQEITDQFISLVNPEIPIHPYVTKLTGIKNSM
LRSAPKFYEIAKRIVEITQDCTLVAHNAGFDYRVLQLEFRRLGYDFQMPSICTVELSKQL
LPDAETYSLGKLARSLGIPVADRHRAFGDALATLKLFKLLLEKDQSKEIVKQSVKTILQK
EYAPKLFNILERLPSTTGVFYVYDYNQSIIYIGKATNIRKKVSQLFTSDSKLGKRIQQDV
GAITFEETGNELLAILKEKEEISIIKPTLNTLQKKPIFIWSLYWDDNENPTKVIVDRTDN
RRKVLESFKHQKDALEYANKINKLKNIELIKEHFKEQKVFFNQLIIIMKGRTINEKTALV
IKNNKFEGYCFFDLNYQIRTEHILNQILIPLTNKDTMNIIKNYLATKNDYKLL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
gtgtacgcaatcatagatttagaaaccacaggaggaaaattcaacgaagaaggaattacc
gaaattgccatttaccgttttgatggacaagaaattaccgaccaatttatcagcttggta
aatccggaaattcccattcatccctatgtaaccaaacttacgggaatcaaaaattctatg
cttcgttcggctccaaaattttatgaaatagccaagcgaattgtagaaattacccaagat
tgtactttggtggcacacaatgcaggttttgattatcgcgtgttgcaattagaatttcgc
aggttgggatatgattttcagatgccttcgatttgcacggtagaactatccaaacaactt
ttgcctgatgccgagacatacagtttaggaaaattggctcgttcgttgggaattcccgta
gcagacagacatcgtgcgtttggagatgcacttgccactttgaaactgttcaaattgttg
ttggaaaaagatcaatctaaagaaattgtaaagcaatcggtaaagactattttacagaaa
gaatacgcccccaaattgttcaatattttggagcgattgccctctacaacaggcgttttt
tatgtctatgattacaatcagagcatcatttatattggtaaagcaacgaatattcgcaaa
aaagtttctcaattgtttacctcagattccaagttgggaaaacgtattcagcaagatgta
ggagcaataacatttgaagaaacaggcaatgaattattggctattttaaaagaaaaagag
gaaatttcgattataaaacctacattgaatacccttcaaaaaaagcccatttttatctgg
agtttgtactgggatgacaatgaaaatccaaccaaagtaatcgtagatagaacagacaac
agaagaaaagtattagaatctttcaaacatcaaaaagatgcgttggaatatgcaaataaa
atcaataagttgaaaaatattgaattgataaaagaacatttcaaagagcaaaaagtattt
tttaatcaattgattatcataatgaaagggaggacaatcaatgaaaaaacagcattggtt
ataaagaataataaatttgaggggtattgtttctttgatttgaattatcaaattcgcacg
gagcatatcctcaatcaaattttaatacctttgaccaataaagacacgatgaatatcatc
aaaaattatttggctacaaaaaatgattataagttgttgtaa
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