Capnocytophaga sp. ARDL2: AB4865_10070
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Entry
AB4865_10070 CDS
T11520
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
capa Capnocytophaga sp. ARDL2
Pathway
capa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
capa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AB4865_10070 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
capa03400
]
AB4865_10070 (priA)
Enzymes [BR:
capa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB4865_10070 (priA)
DNA repair and recombination proteins [BR:
capa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AB4865_10070 (priA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
WHD_PriA_bact
Helicase_C
Zn_ribbon_PriA
PriA_C
Cas3-like_C_2
HTH_65
nSTAND3
AAA_19
nSTAND6
TrmB
AAA_22
AAA_30
ABC_tran
AAA_7
Tudor_5
TsaE
Arginosuc_synth
nSTAND_NTPase5
AAA_14
Nrap_D6
Motif
Other DBs
NCBI-ProteinID:
XFA55015
LinkDB
All DBs
Position
complement(2000912..2003359)
Genome browser
AA seq
815 aa
AA seq
DB search
MSYFVDVIVPLSLPNIFTYSVLLEEFQQLQIGCRVIVPFGKSKYYTAIVVNKHQNPPVLY
QAKNVYEIIDKTPKITLKQLELWQFVADYYLSNLGEVYSTAVPSLFILENETIVYLNIDK
TVDISQLTDEEFVIYEALELQPILKIHEIQAILGKNRVYPLIEKMSEKGIVRLYEETEEK
YKPKTEKYVVLPAHFQSDDALRNLIDEVARTEKQKKLLFTYFQMVPAFPKGILVKDLLEK
AEVSQAVFKNLVEKGIFEISEQSVYRVQMEDAYANEYQLSTEQQTALNEIETQFREKDTV
LLHGITGSGKTEIYFQLIENALKNNQQILFLVPEITLTTQLVQRLNQQFRKEVMVYHSKY
SPNERYEVWMRMLEKPMESKIIIGTRSSVFLPFTDLGLVIVDEEHDTSYKQHDPAPRYHA
RDMAVVLAKSFKAKLLMGSATPSIESYYNCLLGKYRKVMLNKRYNDVPLPKMHLIDIKEA
YKQKAMVGHFSTELIDAINQTLSEGKQVVIYQNRRGFSPVLECGTCGYVPQCTQCDVSLT
YYKSQHKLKCHYCGFSMAYPKNCMVCKTVDISTKGVGTEQIEEEMLKLFPQYSIARIDQD
TTKRKYALAEIIEKYKNGAIDIIVGTQMITKGLDFDNVGLVGVLNVDNSLYFPDFRAHER
AFQTIVQVAGRAGRKQQGKVYLQTYNPFHNVVQQIVNYDYEQMFKEQMFDRHNFHYPPYF
RLIHLQFRHVDFQRVKEASQWMVEHLKQKLQIPILGPEEPTINRIKNLYLRNVMIKVPAN
ASLLDTKKHIQRSLQSFENISQFKSVRVVINVDFY
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgagttattttgttgatgttatcgtaccactttctttgcccaatatatttacctattct
gttttgctagaggaatttcagcaattgcaaatcggttgtagggtgattgtaccttttggg
aaaagcaagtactacactgccattgtggtcaataaacatcaaaatcctcccgttttatat
caagctaaaaatgtttacgaaatcatagacaaaacgcccaaaattaccttaaaacaattg
gaattgtggcaatttgtagcggattattatttgtccaatttgggagaagtctattctacg
gctgttccttcgttgtttattttggaaaatgaaaccattgtgtatctcaatatagataaa
acggtggatattagccaattgaccgatgaagagtttgtgatttacgaagccttggaatta
caacctattttgaaaattcacgaaatacaagcgattttaggaaaaaacagagtgtatcca
ctcattgaaaaaatgtctgaaaaaggtattgtgcgattgtatgaagaaactgaggaaaaa
tacaaacctaaaactgaaaaatatgtagtgcttcctgctcattttcagtcggatgatgcc
ttgcgaaatttgattgatgaagtagcacgaacggaaaaacaaaaaaaactgttgtttacc
tattttcaaatggttcctgcttttcccaagggaattttagtgaaagatttgttggaaaaa
gcagaggtctctcaggctgtttttaaaaatttggtcgaaaaaggcatatttgaaatttca
gagcaatcggtctatcgcgtgcaaatggaagatgcctatgccaatgaatatcaactttca
actgaacaacaaacggctttaaacgaaattgaaacgcaatttagagaaaaagatactgtt
ttattacacgggataacaggttcgggtaaaacggaaatttatttccaattgattgaaaat
gcgttgaaaaacaatcaacaaattttgtttttagtaccagaaattacactgaccactcag
ttggtacagcgactcaatcagcaatttagaaaagaggtgatggtgtatcactcaaaatat
tcgcccaatgaacgctatgaggtatggatgcgtatgctcgaaaaaccaatggaaagtaaa
atcatcatcggtacgcgttcgtctgtgtttttgccgtttaccgatttgggtttggtgatt
gttgatgaagaacacgatacttcgtacaaacagcacgatccagctcctcgttatcacgcc
agagatatggcggtggtgttggcaaaatcattcaaagcaaaattgttgatgggatcagcg
actccgagtatcgaatcgtattacaattgcctgttgggaaaatacagaaaagttatgcta
aacaagcgatacaacgatgtgcctttgccaaaaatgcaccttatcgatataaaggaagcc
tacaaacaaaaagccatggtggggcatttttctaccgaattaatcgatgcaatcaatcaa
acgctttcggaaggaaaacaagtggtaatttatcaaaatcgtcgtggattttccccagtt
ttagaatgtggaacttgtggatatgtacctcaatgtacgcaatgtgatgtgagtttaact
tattataaatcacaacataaactcaaatgtcattactgcggttttagtatggcatacccc
aaaaattgtatggtgtgcaaaacggttgatatttctaccaaaggtgtaggaaccgagcaa
atagaggaagagatgctgaaattatttccacagtattccattgctcgaatagaccaagat
acgaccaaacgaaaatatgctttggcagagattattgaaaaatacaaaaacggagcaatc
gatattattgtaggtacacagatgattaccaaaggattggattttgacaatgtaggattg
gtgggcgtgttgaatgtagacaattcattgtattttccagattttcgagcccacgaacga
gcctttcaaaccatagtgcaagtagcaggtagagcagggcgtaagcaacaaggaaaagtt
tatttacaaacctacaatccttttcacaatgtggtgcaacagatagtcaattatgattac
gagcaaatgtttaaagaacagatgtttgaccgtcataattttcattatccaccgtatttt
cgattgatacatttgcaatttcgtcatgtcgattttcaacgagtaaaagaggcttcgcaa
tggatggtagaacatttaaaacaaaaattgcaaattccgattttaggaccggaagaacct
actatcaaccgaataaagaatctgtatttgcgaaatgtaatgataaaagtaccagccaat
gcttcgcttttggataccaaaaaacacatacagagaagtttgcagtcatttgagaatatt
tcacagtttaaaagcgtacgagtggtgatcaatgtagatttttattga
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