Capnocytophaga sp. FDAARGOS_737: FOC45_00850
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Entry
FOC45_00850 CDS
T06329
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
capf
Capnocytophaga sp. FDAARGOS_737
Pathway
capf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
capf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOC45_00850 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
capf03019
]
FOC45_00850 (rny)
Messenger RNA biogenesis [BR:
capf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FOC45_00850 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
DUF3139
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QGS16887
UniProt:
A0A6B8TEH3
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All DBs
Position
complement(189226..190797)
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AA seq
523 aa
AA seq
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MDSTSIIVIIAVFIIALFVGFSIAKVLEKKNASKIILNAQSEADILLKNAKNEAENIKKE
KIYQAKEKFLELKSEHEKTIAAKDKKMAEAEKRIRDKESQVSNELAQNKRLKDELETKTQ
EAEHRLQTLDKKQEEIDRLHKSQVLQLEVISGLSAEEAKKQLTDSLRSEAQADAMAYIQN
TIEEAKLTAHQEARKIIINTIQRIGTEEAVDNCVSVFNLESDEVKGRIIGREGRNIRALE
AATGVEIIVDDTPEAIILSCFDSVRREIARLSLHKLVTDGRIHPARIEEVVEKTTKQIEE
EIVEIGKRTVIDLGIHGLHPELVKCVGRMKYRSSYGQNLLQHSREVAKLCGVMAAELGLN
PKLAKRAGLLHDIGKVPQVESETPHALLGMEWAEKYGEKPEVCNAIGAHHDEIEMTSLLS
PIVQVCDAISGARPGARRQVLDSYIQRLKDLEDAAFTFQGVKKAYAIQAGRELRVIVESE
KVTDDKAAELSFNLSQKIQTDMTYPGQVKVTVIRETRAVNIAK
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggacagtacaagtattatagtaatcattgccgtttttatcattgcgctattcgtagga
tttagcatagcaaaagttcttgagaagaagaacgcttcaaaaattattctcaatgcacaa
agcgaagccgacattctactcaaaaatgctaaaaacgaggcagaaaacatcaaaaaagaa
aaaatctatcaagccaaagagaaattcttagaacttaaatcagaacacgaaaaaactatc
gctgctaaagacaagaaaatggcagaggcagagaagcgtattcgcgataaggaatcgcaa
gtatctaacgagttagcccaaaacaaacgtttaaaagacgagttagaaactaaaacacaa
gaggctgaacaccgcctgcaaacactcgacaaaaagcaggaggaaatagaccgcctacac
aaaagccaagtgctacagttagaagttatttcaggactttctgctgaagaggccaaaaag
caattaactgattcgctgcgtagcgaagcacaagccgatgcaatggcttatatacaaaac
actattgaagaagcaaaactaactgcacaccaagaggcacgcaaaattatcatcaatacc
atacaacgtatcggtactgaagaggcagtagacaattgtgtatcggtatttaacctcgag
tctgatgaagtaaaaggccgtatcattgggcgcgaagggcgcaacatacgtgccctcgaa
gctgctactggggtagagataatagtagacgacacccctgaagcaattatcctctcttgc
tttgactctgtacgccgcgagatagcacgcctttcattacacaaactcgttaccgatggc
cgtatacaccctgctcgtatagaagaggtagtagaaaaaactactaaacaaatagaagaa
gaaattgttgaaatagggaaacgcactgtgatagacctcggtatacacggactacaccct
gaattagtgaagtgtgtagggcgtatgaaatatcgttcttcatatgggcaaaacttatta
cagcactctcgcgaagtagctaaactatgtggggttatggctgcagaattaggtttaaac
cctaaacttgccaaacgtgccggactactacacgacatcggaaaagtgccacaagtagaa
agtgaaactcctcacgcactactcggtatggaatgggctgagaaatacggcgaaaaacca
gaagtatgcaatgccataggggcacaccacgacgaaatagagatgacctctctactatcg
cctatcgtacaagtatgcgatgctatcagtggagcacgcccaggagcgcgccgccaagtg
cttgactcttatatacaacgcttaaaagacctcgaagacgcagccttcactttccaaggt
gtgaagaaagcttatgctatacaagctggtagagagttacgcgtaatagtagaaagcgaa
aaagtaactgatgataaagcggcagaactatcatttaacctatcgcaaaagatacaaact
gatatgacctacccaggacaggtgaaagtaaccgttatccgcgaaacgagggcagtaaat
atcgccaagtaa
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