Capnocytophaga sp. FDAARGOS_737: FOC45_01420
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Entry
FOC45_01420 CDS
T06329
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
capf
Capnocytophaga sp. FDAARGOS_737
Pathway
capf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
capf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FOC45_01420 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
capf03400
]
FOC45_01420 (uvrB)
DNA repair and recombination proteins [BR:
capf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FOC45_01420 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FOC45_01420 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
SWI2_SNF2
AAA_5
T2SSE
AAA_16
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QGS16990
LinkDB
All DBs
Position
309795..311795
Genome browser
AA seq
666 aa
AA seq
DB search
MKFSIVSDFAPMGDQPQAIQQLVEGIEKDDKYQVLLGVTGSGKTFTIANVVEKIQRPTLV
LAHNKTLAAQLYSEFKAFFPNNAVEYFVSYYDYYQPEAYIPTTGTYIEKDLSINDEIEKL
RLSTTSALLSGRRDVLVVASVSCLYGIGNPVEFQKNVITIKRGDILPRTKLMHRLVQSLY
ARTTADFRHGNFRIKGDVLDVFPGYDDNAFRIHFFGDEIEEIEQFDPTTNHILDHYESLN
IYPANMFVTSPDILQKAIWNIQQDLMKQVEFFEASGKALEAKRLKERTEFDLEMIRELGY
CSGIENYSRYLDGREAGTRPFCLIDYFPDDFLMVIDESHVTMPQVHAMYGGDRSRKENLV
EYGFRLPAAMDNRPLKFEEFEALQNQVIYVSATPADYELQKAQGVYVEQVIRPTGLLDPE
IEVRPSQNQIDDLVEEIQVRVEKDERILVTTLTKRMAEELTKYLTRIGVRCRYIHSDVDT
LERVEIMQDLRKGLFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRSTRSLTQTVGRA
ARNVNGKAIMYADKITDSMQRTIDDTNYRREKQMNYNKAHGITPQPLQKKIENSLSKSPI
TEFHYDPSFAHRQAAEAQAVYMTAKEIEKKIKETRKLMEAAAKDLDFLKAAQYRDEIARL
NELLKQ
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgaaattctctatagtttccgattttgcccctatgggcgaccagccccaagcgatacaa
cagcttgtagagggtattgaaaaagacgataaataccaagtgctattgggcgttacaggc
tcgggcaagacttttactatcgctaatgtggtagagaagatacaacgccctacccttgta
ttagctcataataaaactcttgctgcccaactttactccgaatttaaggcttttttcccc
aataatgcggtggaatacttcgtgtcgtactacgattactaccagcccgaagcctatatt
cctaccacaggtacttatatcgaaaaagacctctctatcaatgatgaaatagaaaagctg
cgcctcagtactacctctgccttactatcgggcaggcgtgatgtgctggtggtcgcctca
gtgtcgtgtttgtatggtatcggtaaccctgtggaatttcagaagaacgttatcactatc
aagcggggcgatatattgccacgcactaagctgatgcaccgccttgtgcagagcctctat
gcccgtactacggctgactttaggcacggtaatttccgtatcaaaggtgatgtgttagac
gttttcccagggtatgacgataacgccttccgcattcacttctttggtgatgaaattgaa
gaaatagaacaattcgaccccactaccaatcatatattagaccactacgagagcctcaat
atctaccctgctaatatgttcgttacctcgccggatatacttcagaaggcgatatggaac
attcagcaagacctgatgaaacaagtagagttttttgaagcatcgggtaaagctttggaa
gcgaaacggctgaaagagcgcacagagtttgacctcgagatgatacgcgaattgggctat
tgctctggtattgagaactactcgcgctacttagacggtcgcgaagcaggtacgcgtccg
ttctgtcttatcgactatttccctgatgatttcttgatggtaatagacgaaagccacgtt
acgatgccccaagtacacgctatgtatgggggcgatcgcagtaggaaggaaaacttggta
gaatacggctttaggttgccggcagctatggataaccgtccgctgaagtttgaagagttt
gaagccctccaaaaccaagtgatatacgtgagtgccacccctgctgactacgagctacag
aaagcgcaaggggtgtatgtagagcaggtgatacgccctacagggctgctcgaccccgag
atagaagtccgcccaagccaaaatcagatagatgaccttgtggaagaaatacaagtacgc
gtagagaaagacgagcgcatactcgtaacgacccttaccaagcgtatggctgaggaactc
accaaataccttactcgtataggggtgcgttgccgttatatacacagcgatgtcgatact
ttggagcgggtagagattatgcaagacctccgcaaagggctttttgatgtactcatagga
gtaaacctcctccgcgagggcttggacttgcccgaagtgtcgcttgtggctattctcgat
gccgataaagagggttttttacgctctacgcgttcgcttacccaaacggtaggacgggcg
gcgcgcaacgtaaatggcaaggctataatgtatgccgacaagataaccgacagtatgcag
cgcaccattgacgacactaactatcgccgtgaaaagcaaatgaactacaacaaagcacac
ggcattaccccacaaccgctacaaaagaagatagagaacagccttagcaagagtccgatt
accgagtttcattatgacccttcgtttgctcacaggcaagcggcagaagctcaggcagta
tatatgacagccaaagagatagagaagaaaattaaggagacccgcaaacttatggaggcc
gccgctaaagacctcgattttctgaaagctgcccaataccgcgatgaaattgcccgacta
aatgaattgctgaagcaatag
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