Capnocytophaga sp. FDAARGOS_737: FOC45_01860
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Entry
FOC45_01860 CDS
T06329
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
capf
Capnocytophaga sp. FDAARGOS_737
Pathway
capf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
capf00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FOC45_01860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
capf03021
]
FOC45_01860
Transcription machinery [BR:
capf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FOC45_01860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
DUF6285
GPW_gp25
Motif
Other DBs
NCBI-ProteinID:
QGS17072
LinkDB
All DBs
Position
complement(422382..423245)
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AA seq
287 aa
AA seq
DB search
MRQLKITKQVTNRETASLDKYLQEIGRVDLITADEEVELAQRIKEGDVAALEKLTKANLR
FVVSVAKQYQNQGLTLPDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKMYAYLEQANERVPSAEEIARELDMSVNDVKESMKNSGRHI
SMDAPLVEGEDSNLYDVIRSNESPNPDKELILASLRTEIERALETLTPREADVIRLYFGL
GDQHAMTLEEIGETFDLTRERVRQIKEKAIRRLKHTSRSKILKTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaactaaaaattaccaaacaggttacgaaccgcgaaacggcctctcttgataag
tacctacaagagatagggcgcgttgatttaatcaccgctgacgaagaggtagaattggca
caacgtatcaaagagggcgatgtagctgccttagaaaaactgaccaaagccaacctgcgc
ttcgtagtatcagtagccaaacagtatcaaaaccaagggcttaccctacccgacctcatc
aacgagggcaatttggggcttataaaggctgcccaacgttttgacgaaacacgaggcttt
aagtttatatcgtatgccgtatggtggattcggcagtctatattgcaagccttagccgag
caatcgcgtatagtacgcttgcctctaaacaaaattggctctatcaataagattaacaag
atgtacgcctatttagagcaagccaacgagcgtgtaccatcggctgaagagattgcccgc
gagcttgatatgtcagtaaatgatgtgaaagaatcgatgaaaaactcaggtcgccatata
tctatggacgctcctttggtagaaggcgaagattcaaacctttacgacgtaatccgaagc
aacgagtcgcctaaccccgacaaagagcttatccttgcctcattgcgcaccgagattgag
cgtgccctcgagaccctcacccctcgtgaagccgacgtaattaggttatactttggctta
ggcgaccagcacgcaatgacccttgaggaaataggcgaaactttcgaccttacccgcgaa
cgtgtacgccagataaaagaaaaagctatccgtcgcctcaaacacacttcgcgaagcaaa
atactaaaaacatacttaggataa
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