Capnocytophaga sp. FDAARGOS_737: FOC45_02015
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Entry
FOC45_02015 CDS
T06329
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
capf
Capnocytophaga sp. FDAARGOS_737
Pathway
capf03030
DNA replication
capf03430
Mismatch repair
capf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
capf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FOC45_02015 (dnaE)
03430 Mismatch repair
FOC45_02015 (dnaE)
03440 Homologous recombination
FOC45_02015 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
capf03032
]
FOC45_02015 (dnaE)
03400 DNA repair and recombination proteins [BR:
capf03400
]
FOC45_02015 (dnaE)
Enzymes [BR:
capf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FOC45_02015 (dnaE)
DNA replication proteins [BR:
capf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FOC45_02015 (dnaE)
DNA repair and recombination proteins [BR:
capf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FOC45_02015 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
DUF655
Cytochrom_C_2
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QGS17103
UniProt:
A0A6B8T5E0
LinkDB
All DBs
Position
complement(461044..465504)
Genome browser
AA seq
1486 aa
AA seq
DB search
MYLIFDTETTGLPRNYNAPISDSNNWPRAVQIAWQLHDQWGALIEHQDFLIAPDGFDIPY
DAEKVHGISTLLAEKQGVPIAEVFAAFNEALSKAQYVVGQNIGFDINIMGAEFYRYGVES
PLDKLPVIDTCTEATANLCKIEGGRGGKYKFPSLTELHSFLFGVPFAEAHNATADVEATA
RCFFELIRRGEGFKEGTFSREYIENFQAHHSSPIGLIGLKHVNLKEASEALRSKGSTPEI
TASEEEIALLETAAFAHLHNHTQYSILQSTTAISDLVKSTAKEKMPAVALTDTGNMMAAF
HFVQEIQKYNKEAEGKNKEAEEKGEAPTETLIKPIIGCEFNICENHLDRSHQDNGYQVVI
LAKNKEGYQNLIKMASIASTKGFYYVPRIDKEIVAQYKADLIVLSGGINGEIPSKILNIG
TKQAEEALLWWKDLFGDDFYLEVMRHGQQEEEHVNSVLVELSKKYSVKLIATNNTFYIHK
KDASAHDILLCVKDGEKQKTPIGRGRGYRFGMPNDEYYFKTSAEMKALFKDIPQAILNIQ
EIIDKVEPYGLARDILLPKFDIPEAFQVADDPTGKKGENNYLRHLTYEGAKRKYLEITDE
VRERLDFELSIIEKTGYPGYFLIVQDFIAAARKMGVSVGPGRGSAAGSAVAYCLDITNMD
PIKYDLLFERFLNPDRVSMPDIDIDFEDSGRQDVINYVIDKYGESQVARIITYGKMAAKS
AIKDTARVLDVPLQESNRLAGLVPSKPPGLSLKNLFNWDEKKLKEKVRSEELPKVDELKQ
LLAGGGEEESNQTIQQANIIEGSVRNTGIHACGVIITPDDITNFVPVALAKDSDLFVTQF
DNSVVESAGLLKMDFLGLSTLTLIKDTIENIKQTHGIELDAEAFPLDDKKTYELFQRGET
VGIFQYESAGMQKYMRELKPTVFADLIAMNALYRPGPLEYIPSFIKRKHGIEPIEYDLPD
MKEYLEETYGITVYQEQVMLLSQKLAGFTKGEADVLRKAMGKKQIAVLAKMKPKFVAQAS
EKGHDTQKLEKIWADWEKFAAYAFNKSHSTCYAWVGYQTAYLKANYPAEYMAAVLSNNMN
DIKTITFFLEECHRMGIRVLPPDVNESLYKFTVNKNGDIRFGMGAVKGVGKAAVDTIVEN
RKERPYTSIFDLAKRVDYKSINKKAFESIALAGGFDSFAGTHRAQYFYAEADGIPFLEKA
IRFGNKYQESKNSAQMSLFGGIDEAEIPEPVIPKCESWGNLEQLRREKEVVGIYISGHPL
DDFKHTIQHYCNINLSQLQNLTPLINRELTVAGMITDEQHRTSKNGSPFGFFTLEDYDGS
FEFRLFNKDYGEFRQYMVMGAFLFIKFKVVEGFLNNQTQQRGEPRIQVLQIEFLQDVLEK
LSKKVTFHLNIEDISQPMIDKYKSLVSKHKGKQPVYFVVHHKEDNIHLNMDNAQLKVSIN
NAFLDELDAQSVVYNLNNQPLEKFIAKKVETQEEEEPAIEELGLSD
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaatattcgataccgaaaccacggggttaccccgtaattataatgctcctatt
agcgatagcaacaactggccgcgcgcagtgcaaatagcgtggcaattgcacgaccagtgg
ggggcgcttatagaacatcaggattttttaattgctcctgatggttttgacattccttat
gatgccgagaaagtacacggcatctctaccctactagctgaaaagcaaggggtgcccatt
gctgaggtgttcgctgccttcaacgaggctcttagtaaggctcagtacgtagtaggacaa
aatataggcttcgatatcaatattatgggggctgagttttatcgctatggagtggaaagt
ccgttggataaactacctgtaatcgatacttgtaccgaggcaaccgctaacctctgcaag
atagagggcggtcgcgggggtaaatataaattcccctcgcttactgagttgcactctttc
ttatttggcgtaccttttgccgaggctcacaacgctactgccgatgtagaagctaccgcc
cgctgtttcttcgaacttataaggcgtggtgagggcttcaaagaaggtacttttagtaga
gaatatattgaaaactttcaagcgcatcactcctctcccatagggcttatagggctcaaa
cacgtaaacctcaaagaggcttccgaggcattgcgcagcaaaggcagtactcctgaaata
accgcttcggaagaagaaatagcgctacttgaaacggctgcctttgcccatctacacaat
catactcaatactctatcttacaatcgactacagctataagcgaccttgtgaaaagcact
gctaaagagaaaatgcctgccgtagcactgactgatacaggcaatatgatggcggctttt
cactttgtgcaagagatacaaaaatacaacaaagaggctgaaggcaaaaataaggaggct
gaagaaaaaggtgaagcacctaccgaaacacttatcaaacctattataggttgtgagttc
aatatttgtgaaaatcacttggatagaagtcaccaggataatggttaccaagtggttatc
ttagctaaaaacaaagaagggtatcagaaccttatcaaaatggcttcgatagcttctact
aaaggcttttattacgtacctcgtatcgacaaagagattgttgcgcagtataaagccgac
cttatagtgctttcgggaggtatcaatggtgaaattccttctaaaatactcaatataggt
accaaacaagctgaagaggctttgttatggtggaaagacctttttggcgatgacttctac
ttagaagtgatgcgccacgggcaacaggaagaagagcacgtaaatagtgtgctggtagag
ttgtctaaaaagtacagcgtgaagctcattgctactaataacactttctacattcataaa
aaagatgctagtgcccacgatattctgctatgcgtaaaagatggtgagaagcagaaaaca
cctatcgggcgcggacgtggctatcgatttggaatgcctaatgacgaatattatttcaaa
acaagtgccgagatgaaggcactcttcaaagatatacctcaggcaatactcaacattcag
gaaattatcgataaggtagagccctatggcttagcccgtgatattctcttgcctaaattt
gatattcctgaagcttttcaggtggcagacgaccctacaggcaagaaaggtgagaacaat
tatttgcgtcaccttacctacgagggagctaagcgcaaatacctagaaatcactgatgag
gtacgcgaacgattagactttgagctttctattatagaaaagacaggttaccctggttac
tttctgatagtgcaagatttcattgcagccgcgcgcaagatgggggtatcggtagggcct
ggtcgtgggtcggcagcagggtcggcagtggcgtattgcttagacattaccaatatggac
ccgataaagtacgacctgctgtttgagcgtttcctaaaccccgaccgtgtatcaatgccc
gatattgatatagactttgaagattccggcagacaagacgttatcaactacgtgattgat
aagtacggcgaaagtcaggtagcacgtatcattacttatggtaaaatggcggctaagtcg
gctataaaagataccgcccgtgtgctggatgtgcctctgcaagagtcgaaccgattggca
ggcttagtaccctctaaaccccctggactttcgctaaaaaacctcttcaattgggacgag
aaaaagctcaaagaaaaagtgcgtagtgaagaactacccaaagtagacgaactcaagcag
cttttggcaggcggaggcgaagaggagagcaaccaaactattcagcaggccaacattatt
gagggctcggtgcgcaacactggtattcacgcctgcggggtgattattacccctgacgac
atcactaactttgtgcctgtagctttagccaaagactctgacctattcgttacccagttt
gacaactcggtagtagaaagtgctggactgctaaagatggacttcttggggcttagtact
cttactcttatcaaagatacgattgagaatataaaacaaacgcacggcatagagctcgat
gctgaggcttttccgttagacgataaaaagacctatgaactctttcaacgaggagaaacg
gtagggatattccaatacgagtccgcaggtatgcagaagtatatgcgcgaactcaagcct
actgtttttgctgacctaatagcgatgaatgctctttaccgcccagggcctctggaatat
ataccgagctttatcaagcggaaacacggtattgagcccatagaatacgacttgcctgat
atgaaagagtatctggaagaaacctatggcatcacggtatatcaggagcaggtgatgcta
ctctcgcaaaagctagcaggctttaccaaaggtgaagctgacgtactacgtaaggcgatg
ggtaagaaacaaatagccgtactagccaaaatgaaacctaagtttgttgcccaagcctca
gaaaaggggcacgatacccaaaaacttgaaaagatatgggctgactgggagaagtttgcg
gcttatgcgttcaacaagtcgcattctacctgctatgcgtgggtgggctaccaaactgcc
tatttgaaagcgaactaccctgccgagtatatggctgcggtactgtctaacaatatgaac
gatattaagacgattactttcttccttgaggaatgtcatcgtatgggtattagggtatta
cctccggatgtaaacgagtcgttatacaaatttacggtaaacaaaaatggggatatccgc
tttggtatgggggcagtaaaaggagttggtaaggctgccgtagacactatagtagaaaac
cgcaaagagcgcccttatacttctattttcgacttagcaaagcgggtagattataagagt
atcaacaaaaaagcctttgaaagtatcgctttagcaggtggttttgactcttttgcaggc
actcaccgcgcccaatatttttatgctgaagctgacggtattcctttccttgagaaagcc
attcgttttgggaacaaatatcaggaaagcaaaaactcagcgcagatgagtctgtttggg
gggatagacgaagccgaaatacctgaaccggtgatacctaaatgtgagtcgtggggcaac
cttgagcagctgcgtcgcgaaaaagaggtagtgggtatctatatatcagggcatccgtta
gacgattttaaacatactattcagcattattgcaatatcaatttatcgcagctacaaaac
ctcacaccacttatcaaccgcgaacttaccgtagcgggtatgataaccgatgagcagcac
cgcaccagcaagaatggtagtccgtttggatttttcactttagaagattatgacggttct
ttcgagttcagactttttaataaggactatggagagtttcgccaatatatggtgatggga
gcctttctattcatcaaattcaaagtagtagaaggctttttgaacaatcaaactcagcag
cgaggcgagccacgtatacaggtactacagatagagttcttgcaagatgtattagaaaaa
ctctctaaaaaagttacctttcacctaaatatagaggatattagtcagccgatgattgat
aaatacaagtctttagtgagcaaacacaaaggaaaacagcctgtttactttgtggtacat
cataaggaggataatatccacctaaatatggacaatgcacagctgaaagtaagtatcaac
aatgcgtttttagacgagttggacgctcaatcggtagtttataacctcaacaaccagcct
ttagagaaatttatagctaagaaagtagagactcaagaagaggaagaacctgctatagaa
gaattaggactatcagactaa
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integrated database retrieval system
