Capnocytophaga sp. FDAARGOS_737: FOC45_02465
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Entry
FOC45_02465 CDS
T06329
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
capf
Capnocytophaga sp. FDAARGOS_737
Pathway
capf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
capf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FOC45_02465 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
capf03400
]
FOC45_02465 (ruvB)
Enzymes [BR:
capf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FOC45_02465 (ruvB)
DNA repair and recombination proteins [BR:
capf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FOC45_02465 (ruvB)
RecFOR pathway proteins
FOC45_02465 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
AAA_3
Mg_chelatase
TIP49
Rad17
AAA_14
nSTAND3
AAA_16
AAA_33
RNA_helicase
TsaE
NB-ARC
AAA_18
NACHT
AAA_PrkA
AAA_28
Bac_DnaA
Sigma54_activ_2
AAA_17
Torsin
NPHP3_N
ABC_tran
AAA_24
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QGS17184
UniProt:
A0A6B8TEC0
LinkDB
All DBs
Position
575159..576181
Genome browser
AA seq
340 aa
AA seq
DB search
MNKNLNPNKENYSAQELDIERALRPLSFDDFAGQEAVLENLKVFVKAANMRNEALDHTLF
HGPPGLGKTTLAHILANELGVGIKITSGPVLDKPGDLAGLLTNLQERDVLFIDEIHRLSP
VVEEYLYSAMEDYKIDIMIESGPNARTVQINLNPFTLIGATTRSGLLTAPMRARFGIQSR
LQYYSTELLADIIQRSASILKMPISMEAAIELASRSRGTPRIANALLRRIRDFAQIKGNG
KIDIEITRFGLKALNVDAHGLDEMDNRILSTLIDKFKGGPVGITTLATAVSESAETIEEV
YEPFLIQQGFIVRTPRGREVTELAYKHLGRSYQLSMMNFE
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaacttaaaccctaataaagaaaattactcggcgcaggagcttgatattgag
cgagccctgcgccctttgtcttttgatgattttgcaggacaagaggcggtattagagaat
ctcaaagtcttcgtaaaagctgccaatatgcgcaacgaagccctcgaccatacccttttt
cacggccctccgggcttgggtaaaactacattggctcacatcttggctaatgagttgggg
gtaggtattaagataacctcaggccctgtgctcgataaacctggtgatttggcaggattg
ctcacaaatcttcaggagcgcgatgtactttttatagacgaaatacaccgcttgagtcca
gtggtagaagagtatctgtactcagctatggaagactataagattgatataatgatagag
tcagggcctaatgcccgcacagtacaaatcaatctaaacccttttacactgataggagcc
actacccgttctggcttgctcacagcccctatgcgcgcgcgcttcggtatacaaagccga
ctacagtattattctactgagcttttagctgacattatacagcgcagtgcttctatccta
aagatgcctatttctatggaagcagctatcgagttagcgagcaggagcagaggtactccg
cgtatcgccaatgcccttttgcgccgcatccgcgattttgctcagataaaaggtaatggc
aagatagatattgaaattacaagattcggactcaaagccctaaatgtcgatgcacacggc
ttagatgaaatggacaacagaatactcagtaccctcatcgataagtttaaaggaggccct
gttgggattacaacccttgctacggctgtctctgaaagtgctgaaactatagaagaggtg
tatgagcctttccttattcaacaaggctttatagtgcgtacccctcgtgggcgcgaggtt
acagagttagcctacaaacacttagggcgtagctatcaactatcgatgatgaacttcgaa
taa
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