Capnocytophaga sp. FDAARGOS_737: FOC45_02545
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Entry
FOC45_02545 CDS
T06329
Name
(GenBank) RNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
capf
Capnocytophaga sp. FDAARGOS_737
Brite
KEGG Orthology (KO) [BR:
capf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
capf03009
]
FOC45_02545
Enzymes [BR:
capf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
FOC45_02545
Ribosome biogenesis [BR:
capf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FOC45_02545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QGS17200
LinkDB
All DBs
Position
complement(596885..597568)
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AA seq
227 aa
AA seq
DB search
MKLITNAENVDVLYEDNHVIGINKRVGDIVQGDKTGDIPLSEHLKAYLKKKYNKPGEAYL
GVVHRLDRPTTGVVLFAKTSKALSRLNAMFADKAQVQKTYWALVDAMPPATEGTLTHWLV
RNEKQNKSVAHNKEVQHSKKAVLHYKLLKSFDHYHLLEIDLITGRHHQIRAQLAAIGLHI
KGDLKYGAKRSNPDGGICLHAYKLTFEHPVKKEVISIEAAPNWQLGK
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttatcacaaacgccgaaaacgtagacgtgctatacgaagacaatcacgtaata
ggcataaacaagcgcgtgggtgacatcgtacagggcgacaaaaccggcgacatccccctt
agcgaacacctaaaggcttacttaaaaaagaaatacaacaagcctggcgaagcatacctc
ggtgtagtacatcggttagatcgtcctaccactggggtagttctttttgctaaaacctcc
aaagccctcagtaggctaaatgctatgtttgccgataaagcacaggtacaaaaaacctat
tgggcattagtagatgcaatgccccctgctactgaaggcactcttacccactggttagtc
cgcaatgaaaaacaaaacaaatcagtagcacataataaagaagtgcagcacagcaaaaaa
gccgtactgcactataaattattgaagtcttttgaccattatcacctattagaaatagac
cttatcacaggtagacatcaccagataagagcgcaattagccgctataggattgcacata
aaaggcgacctaaaatacggtgctaaacgctctaaccccgacgggggcatctgtttgcac
gcctataagctcactttcgagcaccccgtgaagaaagaagtcatcagtattgaagcagcc
cctaattggcaattaggcaaatag
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