Capnocytophaga sp. FDAARGOS_737: FOC45_02645
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Entry
FOC45_02645 CDS
T06329
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
capf
Capnocytophaga sp. FDAARGOS_737
Pathway
capf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
capf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOC45_02645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
capf03019
]
FOC45_02645
03016 Transfer RNA biogenesis [BR:
capf03016
]
FOC45_02645
Enzymes [BR:
capf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FOC45_02645
Messenger RNA biogenesis [BR:
capf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FOC45_02645
Transfer RNA biogenesis [BR:
capf03016
]
Prokaryotic type
tRNA degradation factors
FOC45_02645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
Impact_N
Motif
Other DBs
NCBI-ProteinID:
QGS17217
LinkDB
All DBs
Position
complement(618723..620966)
Genome browser
AA seq
747 aa
AA seq
DB search
MIPEVKKEIIDLGDGRTITIETGKLAKQADGAVVVQMGNAMLLATVVSARDINPETDFLP
LTVDYREKFAAAGRFPGGFFKREARPSDQEILTMRLVDRVLRPLFPKDYHAETQVMIQLI
SHDENVMPDALAGLAASACLAVSDIPFDGPISEVRVGRVNGKFIVNPSREQLEASDIDIM
VGASKDFVAMVEGEMDEVSEKDMAEAIKFAHEAIKPHIEAQLRLAEKVGKTEKRTYEPEV
ENEEVKAKVYPLAYEKCYAIAKENTTKQERGEKFNAVKEECLALFTEEELEELTPLITRY
FGDAEKEAVRNLILEENIRLDGRNTTQIRPIWCEVGYLPSAHGSSIFTRGETQSLTTVTL
GTSREANVIDLPSEQGEERFYLHYNFPPFSTGEARPLRGTSRREIGHGNLAQRALKRMIP
EDCPYTVRVVSEILESNGSSSMATVCAGTLALMDAGVQMVKPVSGIAMGLISDGDRYAVL
SDILGDEDHLGDMDFKVTGTADGITACQMDIKIKGLSYEILEKALNQAREGRMHILGKIT
DTIAQPNPTVKPHAPKIVKMDMPKEYIGAFIGTGGKNIQDLQARTKTTIVVEEVGELGIV
EILGTDEAGIQEAIEAVNAVKFEPVEGETYTVKVVRLVEFGAFVEFVPGKDSLLHISEVS
WDRVDKIEDALKEGDIIEVKYLGIDPKTKKTRVSRKALLPRPPREERPDRPAREDRPKSD
KPYNGKPRGDRNDRPKGHNNNQKPRQE
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgataccagaagtaaaaaaagaaattatcgatttaggtgatggtcgtaccattactatc
gaaactggcaagttagctaaacaagctgacggtgctgtggtggtgcaaatgggcaatgct
atgctattggcaacagtagtatcagcaagagatataaaccctgaaaccgattttctaccc
ctaacggtagactatcgcgagaagtttgcggcagcaggtcgtttccctgggggctttttc
aaacgtgaagctcgccctagcgaccaagaaatcttaacaatgcgcttggtagaccgcgta
ttgcgtccgcttttccctaaagattatcacgctgaaacacaggtgatgatacaacttatc
tcgcacgatgaaaacgtaatgcccgatgcgttagcaggtcttgctgcctcagcgtgtttg
gcagtatcagatataccattcgacggacctatctctgaagtacgtgtaggacgtgtgaat
ggcaaatttatagtaaaccctagtcgcgagcagttagaagcatcagacatcgacattatg
gtgggagcttcaaaagactttgtagcgatggtagaaggtgaaatggacgaagtgagcgaa
aaagatatggcagaagctatcaaatttgctcacgaagctatcaaaccacatatcgaagca
caattgcgtttggctgaaaaagtaggtaagactgaaaaacgcacctatgagcctgaagta
gaaaatgaagaagtaaaagcaaaagtatacccattggcttatgaaaaatgctatgctatt
gctaaagaaaacactactaagcaagaacgcggagaaaagttcaatgcggtgaaagaagag
tgcttagcactttttaccgaagaggaattggaagagctaactcctcttattactcgttat
ttcggagatgccgaaaaagaagctgttcgtaaccttatcttagaggaaaatattcgttta
gacggacgtaatactacccaaatacgccctatctggtgcgaagtaggttatttgccttca
gctcacggttcatctatctttacacgtggcgaaacccaatcgcttactactgttacctta
ggtacttcacgcgaagcaaatgttattgacctaccttcagaacaaggcgaagagcgcttc
tacctacattacaatttccctccattctcaaccggtgaggctcgccctttgcgtggtact
tcacgccgcgagataggacacggaaacttagcacaacgcgcccttaaacgtatgatacca
gaagattgtccttataccgttcgcgtagtgtctgagattttagaatctaatggttcatca
tcaatggctactgtgtgtgcaggtactttggcactaatggatgcaggggtacaaatggta
aaaccggtatcgggtattgctatggggcttatcagcgacggcgatcgttatgcggtactt
tcagacatcttgggcgatgaagaccacttaggcgatatggacttcaaagtaactggtact
gctgatggtatcaccgcttgccaaatggatatcaagataaaaggactttcatatgaaatc
ctcgaaaaagccctcaaccaagcacgtgagggacgtatgcacattttgggcaaaataact
gacactatagcacaacctaatcctactgtgaaacctcacgctcctaagattgtgaagatg
gatatgcctaaagaatatatcggggcatttatcggaacaggaggtaagaacattcaagac
ctacaagctcgtactaaaactaccattgtggtggaagaagtaggcgaactaggtatcgta
gaaatcttaggtactgacgaagctggtatacaagaagctatagaagctgtaaatgcagtg
aaatttgaacctgtagaaggtgaaacttacactgtgaaagtagtacgtttagtagagttt
ggggctttcgtagagtttgtacctggtaaagactctttgctacacatctcagaagtatct
tgggacagagtagataaaatagaagacgctcttaaagaaggtgatatcatagaagtaaaa
tacctcggtattgaccctaaaactaagaagacgagagtatcgcgcaaagccttattacca
cgtcctccacgtgaagagcgccctgaccgcccagcgagagaagaccgccctaagtctgac
aagccttataacggaaaacctcgcggcgaccgcaatgaccgtcctaaaggacacaacaat
aaccaaaaaccacgtcaggaatag
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