Capnocytophaga sp. FDAARGOS_737: FOC45_03645
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Entry
FOC45_03645 CDS
T06329
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
capf
Capnocytophaga sp. FDAARGOS_737
Brite
KEGG Orthology (KO) [BR:
capf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
capf03400
]
FOC45_03645
DNA repair and recombination proteins [BR:
capf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FOC45_03645
Archaeal homologous recombinant proteins
FOC45_03645
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
Motif
Other DBs
NCBI-ProteinID:
QGS17398
UniProt:
A0A6B8T502
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Position
851720..855253
Genome browser
AA seq
1177 aa
AA seq
DB search
MKILSVSLYNIASIEGPFTLDLEAEPLKSVGLFAITGATGAGKSTILDAICLALYNETPR
LAATKSTLSINDGTGEVQVNNVRNLLRKGATNGYAKVVFQAADAKHYEAEWQVRRARGKQ
QGNLQQETIQLTNLTDNEVFAENRKTLVLEKIRELIGLSFDEFTKSVILAQGDFTSFLKA
NDDKRSDILEKLTGTEIYSQISMKVYELSKQHRTELELLERQLAQLSFLSSADREAIEKQ
LAADSQQLKALQEELDTLKAQQQWYADYHSLSDGYQQAMAEREKAIGERNAQADRFSQLS
IIEQLQAVKADILLQQREEAQLQLAVQQLQAAQSEQQRLATDKAAAEVEKSTAAKELTAA
QSVYETAKPAIDKAKALEVRLAEAQRLLTERQAQQQVQMQQLQDKQKELLAKGQSITKGE
QYKQERQAWLNENAAYKLLRDNYQWLQALAVEKEQLSRLMAENANKTAALEVQYEALPLK
EATFTLEELLQQQKDYRNQLQVYQADRLLAQHIQTYTTQKEASEALIAEGEQQVAVSVAA
LTDLQKQLSDAQIECKTAERIYERTREENSQNIGLLRERLVEGEACPLCGSLHHPSAHKA
ISEQLVDTVKQEWEAVQQHLASLSKSIAQKEATQQATLERIAEAQEQQTHYHQLVTEAQS
QLQQSAFYSTYPAEGLQAYLEQCCNDTQEHLAESETLFEQLNRLKDFTTQKENLAAQREE
YQKQEQGQLKQLGTLQLSEAMLRLWKEDTAAFSAKVTKAKTEYTQQEAHLQKAVERLQLL
YQEQSSLATEVAALESQLTQLQTTLQTDTTQYEALKAERQSLLEGEEAAKVEATLQGILA
AAKARYEAAQDLYNSLLLKVTANDKTVESLAERQQHSRERIAEATEKVESWIATYYPEQQ
AYLHAHKIEWANRSHEWLQSERAAQQSLEERIAKYDTLSKEKQQQLEALKDKRPLSLSEE
ETIKIREEKMAAEEPLQQQVIAQKSRLLTDEQQHHIAADLQRKEKEKREVVTQWDKLNSL
IGSHSGGLFRRYAQEYTLDVLLQYANVQMKYLNRRYTLSRIPNSLSLQVLDNDMAAEVRS
VYSLSGGESFLVSLALALALSSLSSTKMNVETLFIDEGFGSLDADTLSVALDALESLQNQ
GKKVGVISHVQEMVERIAVKVVVEKEGNGRSNIVVRS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgaagatactatctgtttccctttacaatatagcttctatcgaaggaccttttacgctt
gatttggaagctgaaccgctgaagtctgtgggcttatttgctatcacaggggctacaggg
gctggcaaatcgactatcttagatgctatttgtcttgcgttatacaacgaaacgccccgt
cttgctgctactaaaagcaccctgagcatcaacgatggtaccggcgaagtgcaggttaat
aacgttagaaacctcctccgcaaaggggctactaatggctatgccaaggtggtttttcag
gcggctgatgctaagcattatgaggccgagtggcaggtgcgtagggcaaggggtaagcag
caaggaaatcttcaacaggaaacaatacagcttactaatctgactgataatgaggtgttt
gctgagaatagaaaaacccttgttttagagaagataagggagctgataggtctttcgttt
gacgagtttaccaagtcggttattttagcacaaggcgattttacttcctttctgaaagct
aatgacgataagcgttcggatatattagaaaagctaacaggtaccgagatatacagtcag
atttctatgaaggtatacgaacttagcaagcagcaccgcactgagcttgagcttttagag
cgacagctggcacagcttagttttttatcgtctgccgaccgagaggcgatagaaaagcaa
ttggctgctgatagccaacaacttaaggcgcttcaggaggaactcgatacactaaaagca
caacagcagtggtacgctgattatcattcgctttcagatgggtatcagcaggctatggct
gagagagaaaaggccataggggagaggaacgcacaagctgatcgtttctctcaactatct
attattgagcagcttcaggcggtaaaagcagatattctgctgcaacagcgggaggaagca
caactacagcttgccgtgcagcaattgcaagccgctcagagcgaacagcaacgcttggct
acagacaaagcagcagcagaggttgagaaatctacagcagccaaagaactcacggctgct
cagtcggtgtatgagactgctaagccagctatcgacaaggcaaaggcgttggaggtgcgt
ttggctgaagcacaacgactgctaaccgagagacaagcgcaacagcaagtccagatgcaa
cagttgcaggataaacaaaaagagcttttggctaaggggcaaagtataacaaaaggcgag
cagtacaagcaagaacgacaagcgtggctaaatgaaaatgcggcttataagttgctcaga
gacaactatcaatggttgcaggcattggctgtagaaaaggaacaactctcgaggcttatg
gctgaaaatgctaataaaacagctgctttagaggttcaatatgaggcacttccgctcaaa
gaagcgacttttacccttgaagagttattgcaacagcaaaaagactaccgaaaccagctg
caagtctatcaggcggataggcttttggcacagcatattcagacctatactactcagaaa
gaggcttcggaagcgcttattgctgagggagaacaacaggtagcagtatcagtggctgcc
cttactgatttgcaaaaacagctttctgacgcgcaaattgagtgtaaaacggcggagcgt
atatatgagcgtactcgtgaggagaactcgcaaaatataggcttattgcgtgagaggttg
gtagagggagaggcgtgtccgctctgtgggtcgctacaccaccctagtgcacataaagct
atttctgagcagctggtcgatacggtgaaacaagaatgggaggcagtgcagcagcatttg
gctagcctctctaagtcgatagcgcagaaagaggcaacgcagcaagctacccttgagcgc
atagccgaggcgcaggagcaacagacgcattatcatcagcttgtaaccgaagcacaaagt
cagttgcagcagtcggctttttatagcacttatcctgcggaagggttacaggcgtacctt
gagcagtgttgtaatgatacacaagagcatttggcggaaagtgaaacgctttttgagcag
cttaatcgcctaaaggattttactacacaaaaagaaaatcttgcagcacagagagaggag
tatcagaaacaagaacaaggacaactgaagcagctcggtactttgcagctttcggaagct
atgctacggctctggaaagaggatactgccgctttttcagcaaaagtaacaaaggctaaa
acggagtacactcagcaagaagcgcacttacaaaaggcagttgaacggctgcaattgctt
tatcaagaacaatcgtctctcgctactgaagtggctgctttagagagccaacttacgcaa
ctacagactaccctacagacggatacaacacaatatgaagcacttaaggctgaacgtcaa
tctctattagagggggaagaggctgctaaggtagaagcgaccttgcaagggatacttgct
gcggctaaagcgcgttacgaagcagcgcaagacctctacaactcccttttgctaaaagta
acggctaatgataagacggtagagtcactcgcagaacggcaacagcatagtagagagcgc
attgctgaagctaccgaaaaggtagagagttggatagcgacctactaccctgagcagcag
gcgtacctccacgcacataagatagaatgggctaatcgcagccacgagtggttgcagtct
gagcgggcagcccagcagtcgcttgaagagcgtatagccaaatacgacacgctttctaaa
gaaaaacaacagcaattagaggcactaaaggataaacgtccgctatctctttctgaagag
gaaactataaagatacgtgaggaaaagatggcggcagaagaaccgctacagcagcaggtg
atagcacaaaaatcgcgcttgctcaccgatgagcagcaacatcatatagctgctgattta
cagcgaaaagagaaggagaaacgagaagtagttacccaatgggataaactcaacagcctg
ataggcagtcattcagggggactctttaggcggtatgcacaagagtacaccctcgatgta
ctgctgcagtacgccaatgtgcagatgaagtaccttaataggcgctatactttatcgcgc
atacctaactcgttgagtttgcaggtgctcgataatgatatggcagcagaggtacgctcg
gtgtattcgctttcagggggggaatcgtttttggtgtcgttagctttggctttagcgctt
tcgtctttgtcgtctaccaagatgaatgtcgagactttgtttatagatgaaggttttggc
tctttagatgccgatacgttgtcggtagctttagatgctttagagagtcttcagaatcaa
gggaagaaagtaggggttatctcgcacgtacaagagatggtagagcgcatagccgtaaag
gtagtagttgagaaggagggcaacgggcgaagtaatatagtcgttaggagttag
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integrated database retrieval system