Capnocytophaga sp. FDAARGOS_737: FOC45_05440
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Entry
FOC45_05440 CDS
T06329
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
capf
Capnocytophaga sp. FDAARGOS_737
Pathway
capf03030
DNA replication
capf03430
Mismatch repair
capf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
capf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FOC45_05440
03430 Mismatch repair
FOC45_05440
03440 Homologous recombination
FOC45_05440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
capf03032
]
FOC45_05440
03400 DNA repair and recombination proteins [BR:
capf03400
]
FOC45_05440
Enzymes [BR:
capf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FOC45_05440
DNA replication proteins [BR:
capf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FOC45_05440
DNA repair and recombination proteins [BR:
capf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FOC45_05440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
GIY-YIG
RNase_H_2
DNA_pol_A_exo1
Rv2179c-like
GGDEF_GdpP
RRM_PARP14_2
Motif
Other DBs
NCBI-ProteinID:
QGS17731
LinkDB
All DBs
Position
1229000..1230328
Genome browser
AA seq
442 aa
AA seq
DB search
MYAILDIETTGGKYDEEGITEIAIYRFDGHELTDQFISLINPERPIQDFVTKLTGINNKM
LRNAPKFYEVAKRIVEITQDTIIVGHNAAFDYRILQTEFRRLGYDYIRTTLCTVELSQQL
LPEKESYSLGKLVRSLGIPMSERHRASGDALATLNLFKYLLEKDTKKTIITASVKNDVRI
EMSSRHLKILDELPEKLGIFYMHNEEGKIIYIGKHKNIKKRVNQLFTSLSKRDRYLQRHT
YKVTYEETGNELIATLKEIEVIQLNKPKCNSRNIHNPSEIVYILSSHYNPQGYLCFSIEL
LATQKEIITTFETQSQAKNFLKKITSEFELNEVDFNGEPVEIYNARASKVLNKYGFWHQN
LAIVDKGRRVGEKSVILLVDGQIKGYGFFHLNYQLTQLGFLENIITPLPNTLINRHLLDQ
YLRTHPHIKVLNLKEQKPFHNE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
ttgtatgcaatattagacatagaaactacaggaggaaagtatgatgaggaaggtatcact
gaaatagctatctatcgatttgatggacacgaacttactgaccaatttatctcgcttatc
aatccagagcgccccatacaagactttgtgacaaaattgacaggtattaataataagatg
cttagaaatgctccaaagttttatgaggtggctaagcgtattgtagaaatcacacaagat
actattattgtagggcataatgcagcttttgattatcgtatattgcaaacagaatttcgt
cgattagggtatgactatataaggacaactctttgtacagtggaactctcgcaacaactc
cttcctgaaaaagagtcgtatagtttaggaaaattagtacggtcattaggtataccaatg
agtgagcgacaccgtgcttcaggagatgctttagcaacgctcaatttatttaaatattta
ctcgaaaaagatactaaaaagaccattatcactgcttcagtaaaaaatgatgtacgcata
gagatgagctcacgtcatctgaaaatacttgatgagctaccagaaaagttaggcatattt
tatatgcataatgaagaggggaagattatttacatagggaagcataaaaatattaaaaag
agagtaaaccaactgtttactagtctctcaaaaagagataggtatttgcagcggcatact
tataaagtaacatatgaagagacaggtaatgagcttatagctactttgaaagaaatagag
gttattcagctcaataagcctaaatgcaatagtaggaatatacataatccttctgagata
gtgtatatacttagttctcattataatccgcaagggtatctgtgtttttcaattgagtta
ttggctactcagaaagaaattataacaacctttgaaacacaatcacaagcaaagaatttt
cttaaaaaaataacatcagaatttgagctgaatgaagtagatttcaatggagaacctgta
gagatttacaatgcacgtgctagtaaagtgttaaataaatacggtttttggcatcaaaat
ttagctatagttgataagggtaggagagtaggagagaagagcgttattctgcttgtagat
gggcaaatcaaaggctatggttttttccatttaaattatcaactcactcagttaggattt
ttagagaatattattacaccgctgcctaatacgctaattaacagacatctattagatcag
tatctgcgtactcatcctcatataaaagtacttaatttgaaagaacaaaaaccttttcat
aatgaataa
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