Capnocytophaga sp. FDAARGOS_737: FOC45_05850
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Entry
FOC45_05850 CDS
T06329
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
capf
Capnocytophaga sp. FDAARGOS_737
Pathway
capf03420
Nucleotide excision repair
capf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
capf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FOC45_05850
03430 Mismatch repair
FOC45_05850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
capf03400
]
FOC45_05850
Enzymes [BR:
capf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FOC45_05850
DNA repair and recombination proteins [BR:
capf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FOC45_05850
MMR (mismatch excision repair)
Other MMR factors
FOC45_05850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
ResIII
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
QGS17804
LinkDB
All DBs
Position
1307324..1309669
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AA seq
781 aa
AA seq
DB search
MDLFSKELERLNAPQRAAVLQKEGPIIVIAGAGSGKTRVLTYRIANLMRQGVDAFNILAL
TFTNKAANEMKKRIADIVGNNEAKNLWMGTFHSVFARILRFEADKLGFPQNFTIYDTQDS
QRLINGIIKEKELDKDVYKYKQIQQRISSLKNNLITVRAYFNSPELIEADAARRQPRFGD
IYQEYVDRCFKAGAMDFDDLLLRTNELLNVFPEVLAKYQNRFQYILVDEYQDTNHSQYLI
VKALADRFHNICVVGDDAQSIYAFRGANINNILNFKSDYPEAKEYKLEQNYRSTKNIVEA
ANSVIEHNKIRLDKVVFTENELGEPIKVHRSATDADEGRFVAGSIFENKMQHQLPNGSFA
VLYRTNSQSRAIEDALRKRDIPYRIYGGLSFYQRKEIKDVLAYLRLIINPNDEEALVRII
NFPARGIGETTMEKLTLAANHYKKSLFEVMYNINKLPDLHINSTTRQKLTDFVVMILNFQ
ALNKEANAFEVAEQVAKKTGLLQEFKKDGTPEGIAKMENIEEMLNGIKDFVAGQEDIADS
TGSLTEYLEDVSLATDSDKEIGDEDRVALMTIHLAKGLEFPYVYVVGMEEDLFPLAKSIQ
SREELEEERRLFYVALTRAEKQAYLTYAENRYRWGQLSPSEPSRFIEEIEEKYLSYLTPT
LSNPNYRYKPLVNREIFGEVDKSKLRLQKPISGTPPAKNAPTGEEQQKLRKLKPINAMQN
IASKDVYNGLDIGTNVYHERFGKGKVVGLEGSGNDKKAQINFEVGGLKNILLRFAKLTIV
N
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggacttattttcaaaggaattagaacgactcaacgctcctcagcgcgcggcagtgctt
caaaaagaaggacctatcattgtaatagcaggtgcaggctcgggaaaaacgcgtgtgctg
acctatcgcatagctaaccttatgcggcaaggggtagacgcttttaacatacttgctctt
acttttacgaataaggctgctaacgaaatgaaaaagcgaattgccgatatagtgggcaat
aacgaggctaagaacctatggatgggtacttttcactccgttttcgcccgaatattgcga
tttgaagctgataagttggggtttccacagaattttaccatttatgatacacaagattcg
caacgtcttatcaatggtattataaaagagaaggaattagacaaagatgtgtacaaatat
aagcaaatacagcagcgaatatcgtctttaaagaacaatcttatcactgtacgggcttat
tttaatagtccggaactgattgaggcagatgctgctaggcgacaaccgcgctttggggat
atttatcaggagtatgtagataggtgtttcaaagcaggggcaatggattttgatgattta
ctcctcagaaccaatgagttactaaatgttttccctgaagtattagctaaataccaaaat
agatttcagtacatattggtagatgagtaccaagatactaaccactctcaatatctgatt
gtcaaggctttagctgaccgttttcacaatatatgcgtggtaggcgacgacgcacagagt
atttatgctttccgcggggcgaatatcaacaatattctgaacttcaaaagtgactatcct
gaagccaaggagtacaaattagagcagaattaccgctcgaccaagaatatcgtagaggct
gccaacagtgtgatagagcataataaaatacgcttagataaggtggtatttactgaaaat
gagttgggtgaacctataaaggtgcatcgcagtgctaccgatgctgatgagggacgattt
gtggcggggtctatctttgagaataagatgcagcatcagttgcccaatggtagctttgca
gtactctaccgtaccaactcgcagtcacgtgccatagaagatgcgctgagaaagcgggat
attccgtatcgtatttatggcgggctttcgttttatcaacgaaaagagataaaagatgtg
ttggcttacctaagacttatcattaaccctaatgatgaagaggctttagtacgtattatt
aacttcccagcgcgcggtataggtgaaactacgatggaaaagctcactttagcggctaat
cattataaaaaatcgctgtttgaggtgatgtacaacattaataaactgcctgatttacac
attaatagcactactcgacagaagttaactgactttgtggtgatgatacttaactttcag
gcgcttaacaaagaggctaatgcttttgaggtagcagaacaagtagctaagaaaacagga
ttgctacaagagtttaagaaagatggtactccagagggaattgctaagatggagaacatc
gaggagatgctaaatggtattaaggatttcgtagcagggcaagaggatatagctgatagc
acaggtagcctaacagagtatttagaagatgtgtcattagctactgattctgataaagaa
ataggcgatgaagaccgtgtagccctgatgaccatacacttagctaaaggattggagttc
ccttatgtatatgtggtgggaatggaagaagaccttttccccttggctaagagtatacaa
tcgcgtgaggagttagaggaagagcgtcgcttattttacgttgcacttacacgtgccgag
aagcaggcctacctcacttatgcagagaatcgttatcgctgggggcagctttcgccctct
gaacctagtaggtttatagaagagatagaagagaaatacttgagttacctcactcctact
ctatctaatcctaactatcgttataaacctttggtgaatagagagatatttggagaagta
gataagagtaagctacgcttgcagaaacctattagtggtacgcctcctgctaaaaacgct
cctacaggtgaagaacagcaaaagctacgcaagttaaagcccatcaatgctatgcagaat
atagccagcaaagatgtttataatggcttagatataggcaccaatgtctatcacgagcgt
tttggaaaaggtaaagtagtaggcttagaaggcagtggtaatgataaaaaagcacaaata
aactttgaggtaggaggtttaaaaaatatcctactgcggtttgcaaagctaactatagtc
aattag
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