Capnocytophaga sp. FDAARGOS_737: FOC45_09525
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Entry
FOC45_09525 CDS
T06329
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
capf
Capnocytophaga sp. FDAARGOS_737
Brite
KEGG Orthology (KO) [BR:
capf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
capf03400
]
FOC45_09525 (sbcD)
DNA repair and recombination proteins [BR:
capf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FOC45_09525 (sbcD)
Archaeal homologous recombinant proteins
FOC45_09525 (sbcD)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
SH3_Tf2-1
Motif
Other DBs
NCBI-ProteinID:
QGS18494
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All DBs
Position
complement(2161432..2162658)
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AA seq
408 aa
AA seq
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MNFLHTADWHLGQTFYQYDRYQEHQHFLEWLLQTIEKQSTDVLLISGDVFDTANPSVAAT
KQFYHFLHQATERFPALQIVAIAGNHDSPVRLEMPAPLLENTHIHLVGYVRRTADKQIDY
NRLILPLFSGEEVAAYLLAVPFLRLGDYPKNEETPADYAQGVAAFYTEITRQAVAIAQGK
PLIAMGHLHASGAEINDDDTAERPIIGGIESISTANFPDALQYVALGHIHKAQALGGTTH
IRYAGSPIPLSFAEKHYEHQVIAFSLEEGKVQHIESLPIPLHTPLLSIPDTYLPAEEVLN
ALMELPDTAPTDNTPYLEVKVLLNEPAPELKSSIFRAIAHKQVRLARIDVRYLHATAASA
DALQSELTLRDLQPVEVLERVYQNKYHEDLPATYRTLFEEALHSIDNS
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaactttctacataccgccgattggcatttagggcagacgttttaccagtacgaccgt
tatcaagagcaccaacatttcttagagtggctcttgcaaactattgaaaaacaatctact
gatgtgctgcttatcagtggcgatgtcttcgatacagccaacccttccgtggcggctact
aagcagttttaccacttccttcatcaggctaccgagcgtttccctgcgcttcagattgtg
gctattgcgggcaatcacgattctcctgtacggcttgaaatgcccgcccctctattagaa
aatacccatatccatctggtgggctacgttaggcgtaccgctgataagcaaatagattat
aaccgactaatcctgccgctttttagtggtgaagaggttgcggcctatcttctggcagtg
cctttcctccgtctgggcgattaccctaaaaacgaagaaacccctgctgattatgcgcaa
ggggtagcggctttttataccgaaattacccgccaagcagtcgccatagcacaaggcaaa
ccgcttatcgctatgggacatttgcacgcttcaggagctgaaatcaatgatgacgacact
gccgagcgtcctatcattggcggcatagaaagcatcagtacggccaacttccctgacgca
ctgcaatatgtagctttggggcatatccacaaggcgcaggcgctgggcggtactacccat
atcagatatgccggcagtcctataccgctttcgtttgctgaaaaacattatgagcatcaa
gtgattgctttttctttggaagaaggaaaagtgcagcatatcgagtccctacctataccg
ctgcacacacctctgcttagcattcccgacacctatttgcctgcggaagaggtactcaat
gcccttatggagctacccgatacggctccaaccgataatacaccttatctcgaagtgaaa
gtattgttaaatgaacccgcacccgaactcaagagcagtattttcagagcgatagcccat
aagcaagtgcgtttagctcgcattgatgtccgttatcttcacgcgacggctgcttctgct
gacgcccttcagagcgaactcaccctccgcgatttacagcccgtagaggtattggagagg
gtttatcaaaacaaataccacgaagacctacccgctacctaccgcaccctctttgaagaa
gccctacattcaattgataattcataa
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