Entry |
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Name |
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KO |
K06915 | DNA double-strand break repair helicase HerA and related ATPase |
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Organism |
caph Capnocytophaga sp. H4358
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Brite |
KEGG Orthology (KO) [BR:caph00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:caph03400]
CGC49_00325
DNA repair and recombination proteins [BR:caph03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
CGC49_00325
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(76837..78387)
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AA seq |
516 aa
MSKIESFKEHILSGYTCKGDYITLGGAIFDGEPIENLLVNLPLKTLNRHGLIAGATGTGK
TKTLQVIAENLSKNGVPVLLMDLKGDLSGLAEAGEEKSFITERHRKIGLPFENQSFPVEL
LTISEQKGVRLRATVSEFGSVLLSRILDLSDVQEGVLAVIFKYCDDHNYPLLDLKDLKKI
LQFATEEGKTDFEKEYGAIAKTSTSAILRKIVELEHQGGELFFGERSFEPSDLLRTNNKG
EGYVNIIRLTDIQDRPKMFSTFMLSLLAEIYSTFPEEGDLKKPKLVIFIDEAHLIFSEAS
KTLLNQLENIVKLIRSKGVGLIFCTQNPTDVPDAVLSQLGMKVQHALRAFTAKDRKAIKL
TAENYPITEYYNTAEVLTSLGTGEAFVTVLNEKGIPTPLVATMLRAPMSRMDILSDTEIN
SLVNRSELAKKYNETIDRESAYELLNKKIAEIQASATKEKERELAEKQQSRQSQSPTTRK
ISRTTRSTAQNPLLKMVTSATFVRGVLGILNKVIKK |
NT seq |
1551 nt +upstreamnt +downstreamnt
atgagtaaaatagaatcttttaaggagcatatcctttcgggatatacctgtaagggcgac
tacattacattaggaggtgcgatattcgatggagaacccattgaaaatctgttagttaat
ttacctctaaaaactttgaatcgtcatggactcatcgcaggtgcgactggtacaggaaaa
accaaaactttgcaggtcattgcagagaatttatccaaaaatggtgttcctgtactttta
atggacttgaagggtgatttaagcggattggcagaagcaggtgaagaaaaatctttcatt
acagagcgtcatagaaagatagggcttccttttgaaaatcaatcgttccctgtggagctt
ttaaccatttcagaacaaaaaggggttcgtttacgtgctacagtttctgagttcgggtcg
gtattactttcccgtattttagatttgagcgatgtacaagaaggcgtgttagctgttatc
tttaagtattgtgatgatcacaattacccgctgttggacttaaaagatttgaaaaaaata
ctccaatttgctacagaagaaggtaaaactgattttgaaaaagaatacggagctatagct
aaaacatcaacaagtgctattctccgaaaaatagtggaattggaacaccaaggaggagaa
ttattcttcggcgaacgtagttttgaaccctctgatttactaagaactaacaacaaaggt
gaagggtatgtaaatattatccgattgacagacattcaagatcgtccaaagatgttttct
actttcatgctcagtttgttagcagaaatctactcaactttcccagaggaaggagacctt
aaaaaacctaaattggtgatttttattgatgaagctcacttaattttcagtgaagcatca
aaaaccttgttgaatcaattagaaaatatcgttaaattaatccgttccaaaggcgtcggt
ttgattttctgcacacaaaatccaacagatgtacctgatgctgtactttcgcaattagga
atgaaagtgcaacacgctctgagagccttcactgccaaagatcgaaaagccatcaaatta
acagctgaaaattacccaatcacagaatactacaacactgcagaagtactgacctcttta
ggaacaggagaagctttcgtgacagttttgaacgaaaaaggaatccctacccctttggtt
gctaccatgcttagagccccgatgagtcgtatggatattctttctgataccgaaataaat
agtttagtaaatcggtcggaattagctaaaaaatacaacgaaaccattgaccgagaaagt
gcttacgagttattaaacaaaaaaatagctgaaattcaagccagtgcaaccaaagaaaaa
gaacgtgagttagctgaaaaacagcaatcgcgtcaatcacaatcccctacaacacgcaaa
atatctcgaacaactcgctcaaccgctcaaaatccgctgttgaaaatggtgacaagtgct
acttttgtgcgtggagtgttgggaatactaaataaagttattaaaaaataa |