Capnocytophaga sp. H4358: CGC49_00330
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Entry
CGC49_00330 CDS
T05519
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
caph
Capnocytophaga sp. H4358
Brite
KEGG Orthology (KO) [BR:
caph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caph03032
]
CGC49_00330
03400 DNA repair and recombination proteins [BR:
caph03400
]
CGC49_00330
Enzymes [BR:
caph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CGC49_00330
DNA replication proteins [BR:
caph03032
]
Prokaryotic type
DNA Topoisomerases
CGC49_00330
DNA repair and recombination proteins [BR:
caph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CGC49_00330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ATA71897
UniProt:
A0AAD0E715
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All DBs
Position
78676..81204
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AA seq
842 aa
AA seq
DB search
MAEGEKLIPVDIGDEMKSAYIDYSMSVIVSRALPDVRDGLKPVHRRVLFGMNELGVFSNS
QHKKSARIVGEVLGKYHPHGDSSVYDTMVRMAQDWSLRYMLVDGKGNYGSVDGDPPAAMR
YTEARMRKISEDMLVDIDKDTVDHQYNFDDTLLEPKVLPTRIPSLLVNGSSGIAVGMATN
MAPHNLTEVIDGTVAYIENPEIDIEELIKYVKAPDFPTGGIIYGYEGVREAFKTGRGRVV
VRAKTNIEEVNGKECIIVTEIPYQVNKAEMIKKTVDLINEKRIEGISEVRDESSGRGGMR
VVYVLKRDAVANVVLNNLFKHTALQTSFSVNNIALVDGRPQLLNLKDLIHYFVEHRYDVV
YRRTQFELKKAQERAHILEGLIIASDNIDEVIAIIRSSENANEARTRLMERFELSEIQSR
AIVEMRLRQLTGLEQDKLRIEYEEVMALIKDLEDIIARKERRTEIIKEELLEVKAKYGDE
RRSQIEYAGGEFSVEDMIPDETMVITITHAGYIKRTSLNEYKTQNRGGVGQKASNTRDQD
FLEHLFVSSNHQYMLFFTQKGKCFWMRVYEIPEGTKTSKGRAIQNLINIEQDDKVKAFIS
VKDLKDEEYINNNFLIMATKQGIVKKTLLEEYSRPRQNGINAITIKDGDELLEAKLTSGK
SQLMLAVKSGRAIRFEEEKVRAVGRNSQGVRGIDLDVETDEVVGMIAIENPQEETVLVVS
ENGYGKRSYIDEPETGEAVYRITNRGGKGVKTISITEKTGNLVAIKSVLSGEDLMIINKS
GIAIRLPIDDLRIMGRATQGVRLINIKGNDSIAAVAKVMKEDEQESSTDENQENGTEIES
TE
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaggagaaaaactcattccagtggacattggtgatgagatgaaatccgcttac
attgactactcaatgtcggtaattgtttcgcgagcattgcccgatgtgcgtgatggtttg
aagccagtgcatcgtagggtgttgttcgggatgaatgaattaggagtttttagcaatagt
caacacaaaaaatcagcaaggattgtgggagaagttcttggtaagtaccacccccatgga
gattcctcagtatatgatactatggtacgtatggctcaagattggagcttacgttacatg
cttgttgatggaaaaggaaactacggttcggttgatggcgatcctcctgcggcaatgcgt
tacacagaggctcgtatgcgtaaaatttccgaagatatgttggttgatattgacaaagac
acggtcgaccatcagtataacttcgatgatactttgttggaacccaaggttttgccaacg
cgtatccccagtttattagttaatggatcttcgggaattgctgtaggtatggcaactaat
atggctcctcataatttgacggaagtcattgatggaacggtagcctacattgaaaatcct
gaaatagatattgaagagctaataaaatatgtcaaagctcctgatttccctacaggaggt
atcatttatggttatgaaggcgttcgagaggcattcaaaacgggacgtggtcgagttgtt
gtacgtgcgaaaactaatatcgaagaagtaaatggaaaggaatgcatcatagttaccgaa
attccatatcaggtcaataaagctgaaatgattaaaaaaacggtggatttgatcaatgag
aagagaattgaaggaatttctgaggtgcgagacgaatcgtctggaaggggaggaatgcgt
gttgtttatgttttgaaacgagatgctgtagctaatgtagtattaaataatttattcaaa
catactgctcttcaaacatcgttcagtgtaaataacattgctttagttgacggtcgtcca
caattgttaaatttgaaggatttaattcactattttgtggaacaccgctatgatgtggtt
tatcgcagaactcagttcgaactgaaaaaagcacaggaaagagcacatattttagaagga
ttaatcattgcttctgataacattgacgaggtaattgccattatccgttcgtcggaaaat
gcgaacgaagctcgtaccagattgatggagcgttttgaattatctgagattcaatcacga
gccattgttgagatgcgtttgcgtcagctaacaggtctggagcaagataagttgcgtatt
gaatatgaggaggttatggctcttattaaagatttggaagacatcatcgcacggaaagag
cgtcgtactgaaattatcaaagaagaattgcttgaggtgaaggcaaaatatggtgatgaa
cgtcgttcacaaattgaatatgcaggaggagagtttagtgttgaggatatgattcctgat
gaaacaatggtcatcacaattacacatgctggatacattaaacgtacatcgttgaacgaa
tacaaaacccaaaataggggaggtgtggggcagaaagcgtccaatacgcgtgaccaagat
ttcttagaacatctgttcgtaagctcgaatcaccaatacatgttgttctttacccaaaaa
ggaaaatgtttttggatgcgcgtgtatgaaattcctgaaggaacaaaaacatcgaaagga
agagccattcaaaatcttatcaatattgaacaagatgataaggttaaagcctttatcagc
gtaaaagatttgaaagatgaggaatacatcaataacaactttttgattatggcgacaaaa
caaggaatcgtcaagaaaacgttattggaggagtactcccgtccacgtcaaaatggaata
aacgctattaccattaaagatggtgatgagttgttagaagcaaaacttacttcaggaaaa
agtcaactaatgttggcagtgaaatcaggacgagctattcgtttcgaagaggaaaaagta
cgtgcagtaggacgtaactcacaaggggttcgaggtattgatttggacgtggaaacagac
gaagtagttggaatgatcgctattgaaaatccgcaggaagaaaccgttttggtggtttca
gaaaacggctacggaaaacgttcttacattgatgaacctgaaactggagaagcagtttac
cgaattaccaatcgaggaggaaaaggagtaaaaaccatttcaatcactgaaaaaacaggt
aacttagtggctattaagagtgtacttagtggtgaagatttgatgattattaacaaatcc
ggaatagctatccgtttaccaatagacgatttacgaattatgggacgtgcaacacaaggg
gttaggctcatcaatattaaaggaaatgactctatagcagctgttgcgaaagttatgaag
gaggatgagcaggaatcttcaacggatgaaaatcaagaaaatggtacagaaattgagagt
acagaatag
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