Capnocytophaga sp. H4358: CGC49_00380
Help
Entry
CGC49_00380 CDS
T05519
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
caph
Capnocytophaga sp. H4358
Pathway
caph03030
DNA replication
caph03430
Mismatch repair
caph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGC49_00380
03430 Mismatch repair
CGC49_00380
03440 Homologous recombination
CGC49_00380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caph03032
]
CGC49_00380
03400 DNA repair and recombination proteins [BR:
caph03400
]
CGC49_00380
Enzymes [BR:
caph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGC49_00380
DNA replication proteins [BR:
caph03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CGC49_00380
DNA repair and recombination proteins [BR:
caph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CGC49_00380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ATA71906
LinkDB
All DBs
Position
92813..93580
Genome browser
AA seq
255 aa
AA seq
DB search
MKLKLSKPICFFDLETTGTDITKDRIVEISILKVFPNGNKESKTWLVNPTVPIPKEASDI
HGITDERVANEPTFKELAKTIHNMIKDSDLAGFNSDRFDIPLLAEEMLRAEIDFDLGNRV
TVDVQTIFHKMEQRTLSAAYKFYCDKILDDAHSAEADTNATYEIFKSQLERYDDLGTDIK
KISEFTTRKQSVDFAGFIVMNDKNEEIFSFGKHKGRRVEDILAEEPGYFGWILNADFPLY
TKKVLTAIKLRKFNS
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaaattatcaaaacctatttgtttttttgatttagaaaccacaggaacagat
attaccaaagatcgtatcgtagagatttctattttaaaagtttttccaaacgggaataaa
gaaagtaaaacctggttggtaaatccgacagtgcctattccaaaagaagcaagtgatatc
catggaattaccgatgaaagagttgctaatgaacctactttcaaagagttagcaaaaaca
atccacaacatgattaaagattctgatttagccggatttaattcagatcgattcgatatt
cctcttctggcagaagaaatgttacgtgccgaaatagattttgatttaggaaaccgcgtt
acagtcgatgtacaaaccatttttcacaaaatggaacaacgaaccttgagtgccgcctat
aagttttactgtgataaaattttagatgatgcccactcagcagaagccgataccaatgcc
acgtacgagattttcaaatctcaacttgaacgatatgatgatttgggaaccgatattaaa
aaaatcagtgaatttacaacacgtaagcaaagtgttgattttgcaggttttatcgtgatg
aacgataaaaatgaagaaattttttcatttggaaaacacaaagggcgacgtgtggaagat
attttagccgaagaacctggctatttcggatggattctaaatgctgattttcctttatac
actaaaaaagtactgacagccattaagttacgtaaatttaattcatag
DBGET
integrated database retrieval system
