Capnocytophaga sp. H4358: CGC49_01515
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Entry
CGC49_01515 CDS
T05519
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
caph
Capnocytophaga sp. H4358
Pathway
caph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CGC49_01515 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caph03400
]
CGC49_01515 (priA)
Enzymes [BR:
caph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CGC49_01515 (priA)
DNA repair and recombination proteins [BR:
caph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CGC49_01515 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
Zn_ribbon_PriA
ResIII
Helicase_C
PriA_C
nSTAND3
TrmB
Cas3-like_C_2
F_T4SS_TraN
Helicase_C_2
ATPase_2
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
ATA72105
LinkDB
All DBs
Position
355055..357505
Genome browser
AA seq
816 aa
AA seq
DB search
MAYFIDVILPIPLRKLFTYNVTKEEAHFLKPGMRVAVPFGKSKVYAALVESVHTTEPSYE
TKDIEYILDETPIVNHSQLRLWKWISDYYMCWLGDVFKAAMPSAFLLESETIVERDETDL
EMTLFSDDEWMVYEALSYKTALTAKEINQIVGKRKALKVVKSLLEKGAIRISEKIFEKYV
PKLEKYIRLAEKYQSDEGMKAVFEDIGKSVKQKQLLVAYFNWMMRNKLPLKVEKLLSDSN
VSATVLKSVVGKGIFEEYYIQKDRINFKGELIGSKSLSEAQLTALKQINEQFNTNQVVLF
QGVTASGKTEIYIHLIQKCLDEGKQVLYLLPEIGLTEHLINRLKKHFGDKLGVYHSKYTT
NERVEVWNNVLNENIKNQLIVGVRSSVFLPFSNLGLVIIDEEHDASYQQFDPAPRFQARD
TAIMLAKIQNAKVLLGSATPSIESLYNAKRKKYGFAYLLKRFGEFQYPDIELIDIRDKHF
RKQMTGHFSDKLIQEIQTTLSEGQQIILFQNQRGYAPEIQCKSCGTVAQCPACDVSLTYH
QGRKQLRCHYCGYAIPILDNCIACGSNELITKGFGTEQITKELAQLFPEVTIDRMDQDTT
SGKYGYQKILSKFEQQQTQILVGTQMISKGLDFENVGLVGVMNADSFIHFPEYKAYERSF
QLLIQVSGRAGRSTRKGKVLIQTYNPNHPVLKQVLEHNFRDMFNNQIAERREFLYPPMVR
LIKISFKHADFNKVTEGADWFGKSLRQGFEKHTDIHILGPESPLVSRIRNEYIKDILLKI
PFTHSAENVKKYILRTQISFQAIPNFRSIRVIYNVS
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggcttatttcattgacgttatacttcccattccgttgcgaaaactattcacatacaac
gtaactaaggaagaagctcatttcctaaaaccagggatgcgtgttgctgtacctttcggg
aaatcaaaagtatatgcggctttggtagagagtgtacacactacagaaccttcatacgaa
accaaagatattgagtatattttggatgaaacccctattgtaaatcattctcaattacga
ctttggaaatggatttcggactactatatgtgttggttgggagatgtatttaaagcagcc
atgccatcagcttttttgttagagagtgaaactatcgtggagagggacgaaactgatttg
gaaatgactcttttttcggatgatgaatggatggtttatgaggcattatcctataaaaca
gcactcactgctaaggaaataaatcaaattgtaggaaaacgaaaagctttgaaagtggtt
aaaagtttattagaaaaaggagccattcgtatttctgaaaaaatatttgaaaaatacgta
cctaaattagaaaaatacattcgtttggcagaaaaataccaatcggatgaaggaatgaaa
gctgtttttgaggatatcggtaagtcagtaaagcaaaagcaattattagtagcctatttt
aattggatgatgcgtaataaacttcctctaaaggtagaaaaattgctctccgattctaac
gtttcggctactgttttgaaatcagtggttggaaaaggaatttttgaggaatattacatc
caaaaagaccgaatcaatttcaaaggtgaattgattggaagtaaatcgctcagcgaggct
cagctaacagctttaaagcaaattaatgaacagtttaatactaaccaagttgttttattt
caaggagttaccgcttctggaaaaactgaaatctacatacatctgattcaaaaatgttta
gatgaaggcaaacaagtattgtatttattacctgagattggacttacggaacatttgatc
aatcgtttgaaaaagcatttcggagataaattaggagtatatcattccaaatatacaact
aatgaacgggtcgaagtttggaataatgtactcaatgaaaatattaaaaatcagctaatt
gtaggagttcgttcgtccgtatttctacctttttccaatttaggattagtcataatcgac
gaggaacacgatgcttcttaccaacaatttgatcctgcacctcgttttcaagctcgtgac
acagccattatgttagctaaaatacagaatgctaaggtgttactaggttcggcaaccccc
tcaattgaaagcctgtacaatgctaagcgtaaaaaatatggatttgcgtatttactaaaa
cgatttggtgagtttcaataccctgatattgagttgattgatattagagataaacatttt
cggaaacagatgacagggcatttttctgataaacttatccaagagatacaaactaccttg
tcggaaggacagcaaataattctattccaaaatcaacgaggttatgctcctgaaatacaa
tgtaaaagttgcggaacagtagctcaatgtcccgcttgtgacgttagtttaacgtatcat
caaggtaggaaacaattgcgttgtcactattgcgggtatgctattccaatacttgataat
tgtattgcttgtggaagtaatgaattgataaccaaaggatttggaacagagcaaatcaca
aaggaattggctcaactttttcctgaagtgaccattgaccgaatggatcaagataccaca
agcggaaaatatggctatcaaaaaatactgtcgaaatttgagcaacaacaaactcaaatt
ttggtgggcacacaaatgattagtaaaggattagattttgaaaatgtaggtttggtagga
gtgatgaacgccgattcgttcattcattttcctgagtataaggcttatgagcgtagtttc
caattactaattcaggtttctggacgagcaggacggagtactagaaaaggtaaagtattg
attcagacttacaatccgaaccatccggtactgaaacaggtattggaacacaattttaga
gatatgttcaacaatcaaatagctgaacgcagggaatttttgtatccaccaatggttcga
ttgataaaaatttcattcaaacatgccgattttaataaagttacagaaggagccgattgg
tttggaaaatcattacgtcaaggatttgaaaaacatactgatatacatattttaggccct
gaaagccctttagtttctcgtatacgaaatgaatatatcaaggacattctactgaaaatt
ccttttacccattccgctgaaaacgtaaaaaaatacattctacgtactcaaattagtttt
caggctatcccgaattttcgttcaattcgagtgatttacaacgttagttaa
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