Capnocytophaga sp. H4358: CGC49_01575
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Entry
CGC49_01575 CDS
T05519
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
caph
Capnocytophaga sp. H4358
Brite
KEGG Orthology (KO) [BR:
caph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caph03016
]
CGC49_01575 (truB)
Enzymes [BR:
caph01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CGC49_01575 (truB)
Transfer RNA biogenesis [BR:
caph03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CGC49_01575 (truB)
Prokaryotic type
CGC49_01575 (truB)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ATA73794
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All DBs
Position
369304..370011
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AA seq
235 aa
AA seq
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MITPEEFSNGKILLIDKPLHWSSFQAINKIKWSIIKNYKLKKIKIGHAGTLDPLASGLLI
VCTGKFTKKITEFQEATKTYTGTIRLGATTPSFDMETEIDQTFSIEHITPELIEKTRQQF
VGEIVQYPPMFSALKKKGKRLYEFAREGDETIEIPSRTVSIEQFNLDTSEFPNIHFEVIC
GKGTYIRSLANDFGKALQCGGYLTALRRTKIGEFSVDEAISPDEFVINHILKSTK
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
attattaccccagaagaattctccaacggaaaaatattactgatagacaaacctttacat
tggtcatcgttccaagctattaataagataaagtggtctataatcaaaaattacaaactc
aaaaagattaaaattggacacgcagggacgctcgacccacttgcttcgggtttattgatt
gtgtgtacaggaaaattcaccaaaaaaattactgagtttcaagaagctacaaaaacatat
acgggtactattcggcttggagcgaccacaccttcttttgatatggaaacggaaatcgat
caaactttttccatagaacacattactcccgagctaattgaaaaaactcgtcaacaattt
gtaggagaaattgttcagtatccgcctatgttttcagcccttaaaaaaaaaggaaaacga
ctttatgaatttgcacgtgaaggagatgaaactattgaaatcccttcacgaacggtttct
attgagcaattcaacttagatacaagtgaatttccaaatattcattttgaagtaatatgc
ggtaaaggaacgtacatccgttccttggctaatgattttgggaaagccttacagtgtggc
ggatacttaactgccttacgacgtacaaaaattggagaattttccgtcgatgaagccatt
tctcccgatgagtttgtaataaatcatatattaaaatcaacaaaatag
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