Capnocytophaga sp. H4358: CGC49_01620
Help
Entry
CGC49_01620 CDS
T05519
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
caph
Capnocytophaga sp. H4358
Pathway
caph03420
Nucleotide excision repair
caph03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
caph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CGC49_01620
03430 Mismatch repair
CGC49_01620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caph03400
]
CGC49_01620
Enzymes [BR:
caph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CGC49_01620
DNA repair and recombination proteins [BR:
caph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CGC49_01620
MMR (mismatch excision repair)
Other MMR factors
CGC49_01620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
ResIII
AAA_11
Ribophorin_II
Motif
Other DBs
NCBI-ProteinID:
ATA72124
UniProt:
A0AAD0E7L9
LinkDB
All DBs
Position
381524..383866
Genome browser
AA seq
780 aa
AA seq
DB search
MEKYLAQLNDAQRAPVLQKEGPLMVIAGAGSGKTRVLTYRIANLIHLGVDAFNILALTFT
NKAANEMKKRITEIVGNEAKNLWMGTFHSVFAKILRIEADKLGYPQNFTIYDTQDSQRLI
NSIIKEMELDKDVYKYKQIQSRISSFKNSLITVRAYFNNPELMEADAMSKRPRMGEIYQA
YVERCFKAGAMDFDDLLLKTNELLNLYPDVLAKYQHRFQYILVDEYQDTNHSQYLIVKAL
ADRFQNICVVGDDAQSIYAFRGANINNILNFQQDYQNARVYRLEQNYRSTKNIVEAANSV
IDHNKTKLEKVVWTANELGEPIKIHRSPTDSDEGRFVAGSIFENKMNLQLPNSAFAVLYR
TNSQSRAIEDALRKRDIPYRIYGGLSFYQRKEVKDMLAYLRLIINPNDEEALVRIINFPA
RGIGGTTLEKLTFAANHYKKSIFEIMYKINQIDGLNMNASTKQRLTDFVIMILNFQSLSK
TSNAFEIAEQVARKTGLLQELKKDGTPEGIAKMENIEEMLNGIKDFVEGQEDVADSTASL
AEYLEDVALVTDMDKDTGDDDRVALMTIHLAKGLEFPYVYIVGMEEDLFPSAMSVNSRAE
LEEERRLFYVALTRAEKQAYLTYAENRYRWGKLSDAEPSRFIDEINNQYVQYLTAPINNP
NYRYKPLINRDIFGEVDKSRLRLQKPTNSTPPPSHAPTGDELQRLRKLKPINSASVSNGT
NPNQGVALTEGMLVFHERFGRGKIISLEGIGSDRKASIDFESGGIRKILLKFAKLQVIEK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatatttagcacaactcaatgatgctcaacgagcccccgtattacaaaaggaa
gggcctctgatggttattgcaggagctggatctggaaagacaagagttttgacctatcgc
attgcaaatttgatacatctgggggtagacgccttcaatatattggcattgacttttacc
aataaagcagccaatgaaatgaaaaaacgtattaccgaaatcgtaggcaatgaggctaaa
aatctgtggatggggacgtttcactctgtttttgctaaaattttacgtattgaagctgat
aaattaggatatcctcaaaattttacaatttatgacacccaagattcacaacgattgata
aactcgatcatcaaggaaatggaattggacaaggatgtctataaatacaagcaaattcaa
tcacgtatttcgtcatttaaaaatagtttaatcaccgttagagcctactttaacaatcct
gagctgatggaagccgatgccatgtcaaaacgtccgcgtatgggggaaatctatcaggct
tatgtggagcgttgcttcaaagcaggagctatggattttgatgatttactactgaaaacc
aatgagttattaaatttatatccagatgtactggccaaatatcaacatcgttttcaatat
attttggtggatgagtatcaggatactaatcactcccagtatttgattgtcaaggcatta
gcagatcgatttcagaatatctgtgtggtaggagacgatgctcaaagtatttatgctttt
cgtggagcgaacatcaataacatcttaaactttcagcaagactatcaaaacgctcgggtc
tatcgactggaacaaaactatcgttcaacgaaaaacatcgttgaagctgccaattcggta
attgaccacaacaaaactaaacttgagaaagtggtatggacagccaacgaattaggcgaa
ccaataaaaatacaccgtagccccaccgactccgatgaaggacgttttgtagcgggatcc
atctttgaaaataagatgaacctacaattaccaaatagtgcttttgcagtactttatcga
accaactcgcaatcacgtgctattgaagatgccttgcgaaaacgcgacattccatacaga
atctacggtggattgtctttctatcaacgtaaggaagtgaaagacatgttagcatattta
cgcttgattatcaatccaaatgatgaagaggctttagtacgaattatcaatttccctgct
cgaggaattggaggaacaacacttgagaaacttacctttgccgcaaatcattacaaaaag
tcgatttttgaaattatgtacaaaattaaccaaatcgacggattgaatatgaatgcttcc
acaaagcaaagattgactgactttgtgattatgatacttaattttcaatcacttagtaaa
acatccaatgcttttgagattgccgaacaggtggctcgaaaaacaggattattacaagaa
ctcaaaaaagacggtacgcctgagggaatcgccaaaatggaaaatatcgaagaaatgctc
aatggtattaaagattttgtggagggacaggaggatgttgccgatagcacagcttcttta
gccgaatatttggaggatgttgctttggttaccgacatggataaagacactggtgatgat
gaccgcgtggcactgatgaccattcacttagccaaaggactggaatttccatacgtatat
attgtaggtatggaagaggatttgttcccttcagcgatgagcgtaaactcacgtgccgaa
ttagaagaagagcgtcgtctgttttatgtagctcttactcgtgcggaaaaacaggcttat
ttaacctatgcggaaaatcgctaccgttggggtaagctatcggatgcagaacctagccga
ttcattgatgaaattaacaaccaatacgtacagtacctaacagctcctataaacaatcca
aactaccgatacaaaccgctaattaacagagatattttcggagaagtagataaaagtcga
ctgcgcttacaaaaacctacaaactccacccctcccccttctcatgctccaacaggagat
gaactacaacgtttacgcaagctaaaacccatcaacagtgcttctgttagtaatggtact
aaccccaaccaaggagtcgccttaaccgaaggaatgcttgtttttcacgagcgttttggc
agaggaaaaatcatctctttggaaggtattggaagcgaccgaaaagcaagtattgatttt
gagtcaggaggcattcggaaaatactcctcaaatttgcaaaattgcaagtcattgaaaaa
tag
DBGET
integrated database retrieval system
