KEGG   Capnocytophaga sp. H4358: CGC49_02020
Entry
CGC49_02020       CDS       T05519                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
caph  Capnocytophaga sp. H4358
Pathway
caph03030  DNA replication
caph03430  Mismatch repair
caph03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:caph00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CGC49_02020
   03430 Mismatch repair
    CGC49_02020
   03440 Homologous recombination
    CGC49_02020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:caph03032]
    CGC49_02020
   03400 DNA repair and recombination proteins [BR:caph03400]
    CGC49_02020
Enzymes [BR:caph01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CGC49_02020
DNA replication proteins [BR:caph03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CGC49_02020
DNA repair and recombination proteins [BR:caph03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CGC49_02020
SSDB
Motif
Pfam: RNase_T DEDDh_C RNase_H_2 DNApol_Exo HTH_Mga MtaB CAF1 DNA_pol_A_exo1 PLCB1-4-like_EFh
Other DBs
NCBI-ProteinID: ATA73801
LinkDB
Position
477192..477815
AA seq 207 aa
MSIFNIFSKRQKDDLPLNKVKFVVFDTETTGFNFATDRILSIGAITILDNQMYVKESFEI
FLQQEKSNPESIPIHGIIKEHKYNKVPEKMAVTIFSDYAKDAVLVGHHVGYDIKMINTAL
ERHQLPTLKNEFIDTNYLFKKTKVINYLLKNDKNYSLDEVCQELNITTHDRHNAAGDAFL
TAIAFLKILHKLAESKKITTLSRLLKL
NT seq 624 nt   +upstreamnt  +downstreamnt
atgtcaatattcaatatattttcgaaaagacaaaaagatgatttacctctcaataaagtg
aaatttgtggtgttcgatactgaaactacagggtttaatttcgcaacggatagaatttta
tctattggagcaattacgattttggataatcaaatgtacgtgaaagaaagtttcgaaatt
tttctgcaacaagaaaaatcaaaccccgaaagtattcctattcatggaattatcaaggag
cataagtacaacaaagttccagaaaaaatggctgttaccattttttcagactatgctaaa
gatgccgttttagtaggacaccatgtaggatatgacattaaaatgattaatacagctctc
gaacgacatcaactaccaactctcaaaaatgagtttatcgacacaaactatctatttaaa
aagaccaaagtaatcaattatcttcttaaaaatgataaaaattatagcttagatgaggtt
tgtcaagagttgaacataaccactcatgatcgacataacgcagctggtgatgctttccta
acagcgattgctttcttaaagatacttcataaactcgctgaatcaaagaaaattacaact
ctaagcagattattaaaattgtaa

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