Capnocytophaga sp. H4358: CGC49_03475
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Entry
CGC49_03475 CDS
T05519
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
caph
Capnocytophaga sp. H4358
Brite
KEGG Orthology (KO) [BR:
caph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caph03009
]
CGC49_03475 (rimO)
Enzymes [BR:
caph01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CGC49_03475 (rimO)
Ribosome biogenesis [BR:
caph03009
]
Prokaryotic type
ribosomal protein modification factors
CGC49_03475 (rimO)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TMF_TATA_bd
CLP1_P
CCDC22_CC
Motif
Other DBs
NCBI-ProteinID:
ATA72443
UniProt:
A0AAC9YYD1
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All DBs
Position
807838..809145
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AA seq
435 aa
AA seq
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MRTKSIKKNVINVVTLGCSKNVYDSEVLMGQLKAGGKEVVHEKEGNIVVINTCGFINNAK
EESVNTILDYVQRKEEGLVDKVYVMGCLSERYKPDLEKEIPDVDQYFGTSDLPALLKVLG
ADYKHELIGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGSHRSTPIEDLVQEAEKLA
TKGVKELILIAQDLTYYGLDLYKKRKLADLLRALVKVEGIEWIRLHYAFPTGFPMDVIDV
MKEEPKICNYLDIPLQHISDNILKSMRRGTTKEKTTKLLKEFKQKLPEMAIRTTLIVGYP
GETQEDFETLKEFVKEMRFDRLGCFTYSHEENTHAYSLEDDVPEEVKLQRANDIMELQSQ
ISWELNQEKIGKTFRCLIDRKEGNYFVGRTEHDSPDVDNEVLIDAKKFYVKLGEFIDVKI
IDSADYDLYAEPLNL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaaatcaataaagaaaaatgtcataaacgtagttacattaggatgttccaaa
aacgtttatgacagtgaggttttgatgggacaactcaaagcgggtggaaaggaagttgta
cacgaaaaagaaggtaatattgtggttatcaatacatgcggattcatcaataatgccaaa
gaagagagcgtaaacactattttagattatgtgcaacgtaaagaggaaggtttagtggac
aaggtttatgtgatgggatgtttaagcgaacgttacaaacctgatttggaaaaagaaatc
cctgatgttgatcagtattttggtactagcgacttacctgctttgttgaaagtactgggg
gcagactacaaacacgagcttatcggtgagcgacttactacaacaccaaagaattatgcc
taccttaaaatagctgaaggctgcgaccgcccatgtagtttttgtgctattccgctaatg
cgtggaagccatcgtagcactcccattgaagatttggttcaggaagccgaaaaactcgca
accaaaggtgtgaaggagctgattctgattgcacaagacctaacttattacggattagac
ctttacaagaaacgaaaattagccgatttacttcgtgccttagttaaagtagagggtatt
gagtggattcgtttgcattatgcctttccgacaggtttcccgatggatgtcattgatgtg
atgaaagaagaaccgaagatttgtaattatttggatattccgctacaacacatttcagat
aacatcctcaaaagtatgcgaagaggcaccaccaaagaaaaaacgaccaagttactaaaa
gagtttaaacaaaaacttccagaaatggctatccgcacaacgttgattgtaggataccct
ggagaaacgcaagaggatttcgaaacccttaaagaatttgtaaaagaaatgcgtttcgat
cgtttaggatgtttcacctatagccacgaagaaaatactcatgcttatagtttggaagat
gatgttcctgaggaagttaaattgcaacgtgccaacgatataatggaactacaatcacaa
atttcgtgggaacttaatcaagaaaaaatcggaaaaacattccgttgtcttatcgaccgg
aaggaagggaattactttgtaggtcgtaccgaacacgattcccccgatgtggataacgaa
gtgctgattgacgctaaaaaattctatgtgaaattaggtgaatttatcgatgtaaaaatc
atagattcagctgattatgacctatatgctgaacctttaaatctgtaa
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