Capnocytophaga sp. H4358: CGC49_03875
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Entry
CGC49_03875 CDS
T05519
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
caph
Capnocytophaga sp. H4358
Pathway
caph00521
Streptomycin biosynthesis
caph00523
Polyketide sugar unit biosynthesis
caph00525
Acarbose and validamycin biosynthesis
caph00541
Biosynthesis of various nucleotide sugars
caph01100
Metabolic pathways
caph01110
Biosynthesis of secondary metabolites
caph01250
Biosynthesis of nucleotide sugars
Module
caph_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
caph00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CGC49_03875 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CGC49_03875 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CGC49_03875 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CGC49_03875 (rfbB)
00525 Acarbose and validamycin biosynthesis
CGC49_03875 (rfbB)
Enzymes [BR:
caph01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CGC49_03875 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
adh_short
NmrA
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
ATA72509
UniProt:
A0AAC9YYC9
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Position
912353..913411
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AA seq
352 aa
AA seq
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MKKNILITGGAGFIGSHVVRLFVNKYPDYRIINLDLLTYAGNLENLKDIEKSPNYEFVKA
DICDFQAMKQLIESKNISGIIHLAAESHVDRSIKDPFTFAKTNVMGTLSLLQAAREVWNG
NWDRKLFYHVSTDEVYGALQMDNTLFTENTKYDPHSPYSASKASSDHFVRAYQDTYGLPT
VISNCSNNYGSYQFPEKLIPLFINNIRNNKPLPVYGRGENVRDWLYVEDHARAIDVIFHK
GKIGDTYNIGGFNEWKNIDLIRVIIKEVDKQLGRPEGSSEKLITFVTDRAGHDLRYAIDA
TKIKEELGWEPSLQFEEGIQRTVAWYLQNQEWLDTITSGDYQKYYDQMYKGR
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaacattttaataacaggcggagctggatttataggctcgcacgtggttcgg
ttgtttgtaaacaaatatcctgactacagaatcatcaatttggatttactaacgtatgcc
ggaaacttggaaaacctcaaagatatagagaaatcacctaactacgagttcgtaaaggct
gatatctgcgactttcaggctatgaagcaactcatcgagagcaaaaacatcagcggaatt
atccatttggcagcagaaagccacgtagaccgtagcattaaagaccctttcacctttgcg
aagaccaatgttatgggaacgctatcgctcctacaggcagcacgtgaggtttggaacggc
aattgggacagaaagctgttctaccacgtctccaccgatgaagtgtatggtgctttgcag
atggacaacacacttttcacggaaaacacaaagtacgacccacattcgccctattcggca
tcgaaagcctcgtctgaccacttcgttcgagcttatcaagacacctacggacttccgaca
gttatctccaactgctccaacaactacggaagctatcagtttcctgaaaaattaatcccc
ttattcatcaataacattcgtaataataagccgttacccgtttacggacgtggcgaaaat
gtgcgagattggctctacgttgaagaccacgccagagcaattgacgtaatattccacaag
ggtaaaattggtgacacgtacaacatcggaggctttaacgaatggaaaaacatcgacttg
atacgcgtcatcatcaaagaagtagataagcagttgggtcgccctgaaggaagctcggaa
aaactcattacgtttgttactgaccgagcagggcacgaccttcgttatgctattgacgct
acaaaaattaaggaagagcttggttgggagccttccttgcagttcgaagagggaattcag
cgtaccgtagcttggtatctgcaaaatcaggaatggttagatactattaccagtggcgac
taccaaaaatattacgaccagatgtataaagggagatag
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