Capnocytophaga sp. H4358: CGC49_04445
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Entry
CGC49_04445 CDS
T05519
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
caph
Capnocytophaga sp. H4358
Pathway
caph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CGC49_04445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caph03400
]
CGC49_04445
DNA repair and recombination proteins [BR:
caph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CGC49_04445
RecFOR pathway proteins
CGC49_04445
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Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
HHH_3
RecR_HhH
5_3_exonuc
HHH_2
BREX_PglY_6th
DUF2642
Motif
Other DBs
NCBI-ProteinID:
ATA72612
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All DBs
Position
1034518..1035102
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AA seq
194 aa
AA seq
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MITQLQGKLIEKNPTHVVVDCNGVGYFVNITLNTFAALPEADSIKIYTHLQIKEDSHTLY
GFLTRAEREIFVLLLSVSGVGASTARMMLSSLTAAQVRGAIVNGDVASIQSVKGIGAKTA
QRIILDLREKMMKVQNIEEVALTQPNTNKEEALAALEVLGFVRKQAEKVVDKIIKSDSEE
LSVEQIIKIALKSL
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgattactcagttacaaggaaaattgattgagaaaaaccctactcacgtggttgttgac
tgcaacggtgtggggtatttcgtgaacatcaccttaaatacttttgcagctctacctgaa
gctgattccataaaaatttacactcatctacaaatcaaggaagactctcatacactttac
ggatttctcacccgtgctgagcgtgagatattcgtactgttgctttccgtatcaggtgtt
ggagcgagtacagctcggatgatgctatcatcattgacagctgctcaagttcgcggagct
attgtcaatggagatgttgctagtattcagagtgttaaaggtataggagcaaaaactgca
caacgtattattttggatttacgagaaaagatgatgaaagtgcaaaatattgaagaagta
gcccttacacaaccaaatacaaacaaagaggaagctttagcagctttagaagtattagga
tttgtgcgtaaacaagccgaaaaagtagtagataaaattatcaaatcagattcggaagaa
cttagtgttgaacaaattatcaaaatagctctgaaaagtttataa
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