Capnocytophaga sp. H4358: CGC49_04860
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Entry
CGC49_04860 CDS
T05519
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
caph
Capnocytophaga sp. H4358
Brite
KEGG Orthology (KO) [BR:
caph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caph03016
]
CGC49_04860
Enzymes [BR:
caph01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
CGC49_04860
Transfer RNA biogenesis [BR:
caph03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
CGC49_04860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
DUF1368
Motif
Other DBs
NCBI-ProteinID:
ATA72683
UniProt:
A0AAC9YYW0
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All DBs
Position
complement(1133911..1135359)
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AA seq
482 aa
AA seq
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MEKVIDESKQGQSLVLEVNRNNSKKVYIESYGCQMNFSDSEIVASILSQEGYNTTQTLEE
ADLVLLNTCSIREKAEQTIRKRLEQFNSVKRSRPAMKVGVLGCMAERLKHAFLEEEKIVD
MVVGPDAYKDLPNLLQEVDGGREAVNVILSKEETYADVSPIRLNSNGVTAFVSIMRGCDN
MCTFCIVPFTRGRERSRDPFSILEEINSLQVAGFKEVTLLGQNVDSYLWYGGGLKKDFDK
ATEMEKATAVNFAKLLDMVATAHPKMRIRFSTSNPQDMTLDVIDTMAKHHNICKYIHLPV
QSGSDRILRAMNRLHTRAEYFTLIDNIRERMPECAISQDMIAGFPTETEEDHQDTLSLME
YVKYDFGFMFAYSERPGTLAARKIADDVPEETKKRRLAEIIDLQQKHSLYRTQQKIGQIC
EVLIEGNSKKSDAQWMGRNTQNTVVVFPKEHYKVGDFVNVKIESCTSTTLIGKAIGYSQM
MK
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagtgatagatgaatcgaagcaggggcaaagtcttgttttagaggtaaataga
aataacagcaaaaaggtatatatcgaaagttatggctgtcagatgaatttttctgacagc
gagattgtggcttctattctttctcaagagggttacaatactacgcaaactttagaggag
gccgatttggtgttgcttaatacttgttcgattcgtgagaaagctgaacaaaccattcga
aaacggctggagcaatttaactctgtaaaacgcagtcgtccggctatgaaagtgggggtg
ttgggctgtatggcagaacgtttgaaacatgcctttttggaggaggaaaagatagtagat
atggtagttggccctgatgcctataaagatttgcctaacttattacaagaggtagatgga
ggacgagaggccgtaaatgtgattctttccaaggaagaaacgtatgccgatgtttctcct
atacgtctcaatagcaatggagtaactgctttcgtttcaattatgcgtggatgtgataat
atgtgtacattctgcatcgtaccttttacgagagggcgtgaacgaagtcgcgatccattt
tctatacttgaagaaatcaatagtttgcaagtagcaggttttaaggaagttactctattg
ggacagaatgtagatagttacctttggtatggaggcggacttaagaaggattttgataaa
gctactgaaatggaaaaggcaacggcggtcaattttgccaaattattggatatggttgcc
acggcacatccaaaaatgcgcattcgtttttcaacatccaatcctcaagatatgactttg
gatgtgatagatacgatggcaaaacatcataatatctgcaagtatattcatttgcctgta
caaagcggaagcgatcgcatactccgagcaatgaatagactacatactcgagctgagtat
tttacgttgattgacaacattcgtgagcgtatgcctgaatgtgccatttctcaagatatg
attgcaggatttccaacggaaaccgaagaggatcaccaagatacgctttctctcatggaa
tatgtgaaatatgattttggatttatgtttgcctattcagaacgaccaggaacattagct
gctcgcaaaatcgctgatgatgttcccgaagaaacaaagaaacgtcgtttagcagaaatt
atagacctacaacagaaacacagtctgtatcgcacacaacaaaaaatcggacagatttgc
gaggtgctcatagagggaaattccaaaaaatcagatgctcagtggatggggcgtaacact
caaaatacagtggtggttttcccgaaagaacattacaaagtaggggattttgtgaatgtt
aagatagaaagttgtacttcaactacacttattggtaaggcaataggctacagccaaatg
atgaaataa
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