Capnocytophaga sp. H4358: CGC49_05475
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Entry
CGC49_05475 CDS
T05519
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
caph
Capnocytophaga sp. H4358
Pathway
caph03030
DNA replication
caph03430
Mismatch repair
caph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGC49_05475
03430 Mismatch repair
CGC49_05475
03440 Homologous recombination
CGC49_05475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caph03032
]
CGC49_05475
03400 DNA repair and recombination proteins [BR:
caph03400
]
CGC49_05475
Enzymes [BR:
caph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGC49_05475
DNA replication proteins [BR:
caph03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CGC49_05475
DNA repair and recombination proteins [BR:
caph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CGC49_05475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DEDDh_C
GIY-YIG
Rv2179c-like
DNA_pol_A_exo1
P_C10
DUF7508
Motif
Other DBs
NCBI-ProteinID:
ATA72786
LinkDB
All DBs
Position
complement(1274487..1275878)
Genome browser
AA seq
463 aa
AA seq
DB search
MYAILDIETTGGKFNEEGITEIAIYRFDGHEVVDQFITLINPEREIQDFVVKLTGINNKM
LRNAPKFYEVAKRIIEITQDCVIVAHNASFDYRILRTEYRRLGYEFSRTTLCTVELAQRL
IPGKESYSLGKLARSLGIPVSERHRACGDALATVKLFKYLLEKDSKKEIITTYLKSNAPT
INVRHIRMLDELPERLGVYYMYNEAGEIIYIGKNKNIKKRVTQHFSSPLKRDVLLQKQTY
KITYEETGNELITRLKELHELEHNNPKYNKNNKSNTTKINYVLTSHFNRSGYLCFSTEMF
QTQKTSFITTFETIHQAQNFLYQITEEFGLCPKLQRLSEAKKNCHNYTIKKCNGACIDEE
AVEIYNQRAEQVIKKYGFVNQTIAIIDKGRTFDEKSVILVVNGIVKGYGFFNLNYQLSQV
EILENLITPLPNSLKNRHIIQSYVRNHKVKIIPINTQNSISYE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgcaattcttgacattgagaccacgggcgggaaatttaatgaagaaggcatcact
gaaattgccatctatcgttttgacgggcatgaggttgttgatcaattcataacccttatt
aatcctgaacgtgaaatacaagattttgtagtgaaattgacgggcattaacaacaaaatg
ctacgaaatgcccccaaattttatgaagttgccaaacgaattatcgaaattacgcaggat
tgtgtcattgttgctcataatgcgagttttgattatcgcattttgcgaaccgaataccgc
cgtttgggatacgaattttctcgcaccactctctgcacggttgagttggcacaacgatta
attccgggtaaagaatcttatagtttaggtaagttagcacgttctttgggaattccagtt
agtgagcgacatagagcttgtggtgatgcacttgccacagtcaaactctttaaatatctc
ttagaaaaagacagcaaaaaagagattatcactacgtatttgaaaagcaacgctcctaca
ataaatgtccgccatattcgtatgctggatgagttacccgaacgtttgggagtgtactat
atgtacaatgaagcgggagaaatcatctacatcggaaagaataagaatatcaaaaaacga
gtgacgcaacatttttcctcacccttgaagcgagatgttttattgcaaaaacaaacatat
aaaattacatacgaagaaacaggaaatgaactcattacacgattgaaggagctacacgag
ttggagcataacaaccccaaatacaacaaaaataataagtcaaatacaacaaaaatcaac
tatgttttgacttcgcactttaatcgcagtggatatctttgtttttcaaccgagatgttt
caaacacaaaaaacatcgttcataactacttttgaaacaattcaccaggctcaaaatttt
ctgtatcagattacagaagaatttggattatgccccaaactgcagcggctttcggaggct
aaaaaaaattgtcataactacactatcaaaaaatgtaatggagcgtgtattgatgaagaa
gctgtggaaatttacaaccaacgtgccgagcaggtaataaaaaagtatggctttgtaaat
caaaccattgctatcattgacaaaggacgtacatttgatgagaagagtgtgattttggtc
gtgaacggaatcgtcaaaggttacggattttttaatttgaattatcaactatcacaggta
gaaatcttggagaatttgatcacgcctttgcctaattcattaaaaaacagacatatcata
caatcgtacgttcgaaatcataaagtaaaaataataccaataaacacacaaaattcaata
tcttatgaataa
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