Capnocytophaga sp. H4358: CGC49_07000
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Entry
CGC49_07000 CDS
T05519
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
caph
Capnocytophaga sp. H4358
Pathway
caph03030
DNA replication
caph03430
Mismatch repair
caph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGC49_07000 (holA)
03430 Mismatch repair
CGC49_07000 (holA)
03440 Homologous recombination
CGC49_07000 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caph03032
]
CGC49_07000 (holA)
03400 DNA repair and recombination proteins [BR:
caph03400
]
CGC49_07000 (holA)
Enzymes [BR:
caph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGC49_07000 (holA)
DNA replication proteins [BR:
caph03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CGC49_07000 (holA)
DNA repair and recombination proteins [BR:
caph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CGC49_07000 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
ATA73047
UniProt:
A0AAC9Z1I2
LinkDB
All DBs
Position
1648532..1649536
Genome browser
AA seq
334 aa
AA seq
DB search
MKESKSIIANIKKGQIAPIYFLMGDEPYFIDEIANYIENNVLSEDEKGFNQMILYGQDVS
VSDIVNNAKRFPMMASHQVIIVKEAQNLGNSIEDLVPYVENCTPTTVLVMCYKYKTLDKR
KKLVKSLAKNGVLLESKKLYEKDVIPWISEVLKEKKYTIQPKATQMLVEFLGTDLSRIAN
ELDKLTIIVPQNSEITPEIIEKNIGISKDFNNFELRRALGERDELKTMRIINYFADNPKD
NPIVVTLGTLYTFFQELLAYHGLTDQSDQNVAKVLGKNPYFVKEYHIAARNYPMKTVSGI
IEKLREIDMKSKGVGSVNMSQSDLLKELVIKILR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaatctaaatccattatcgcaaatataaaaaaaggacagattgcccctatttat
ttcctaatgggagatgagccctatttcatcgatgaaattgctaactatatcgaaaacaac
gtactatcggaagatgaaaaggggtttaatcaaatgatactctatgggcaagatgtgtcg
gtaagcgatattgtgaataatgccaaacgcttcccaatgatggcttctcatcaggtaata
atagttaaagaagctcaaaatttagggaattctattgaagatttggttccttatgttgag
aattgtacacctactacggttttagtaatgtgctacaagtacaaaactttggataaacgc
aaaaaacttgttaagagtttagcaaaaaacggtgtgcttcttgagagtaaaaaactttat
gaaaaagacgtaattccttggatttcagaagtgttaaaagaaaaaaaatatacaatacaa
cccaaagcaactcaaatgttggtggaatttttaggaaccgatttgagtcgtatagctaat
gaattggataagttaactatcattgtaccacaaaactcagaaattactcctgagataatt
gaaaaaaatataggaatcagtaaggattttaacaattttgaacttcgtagagctttaggt
gagcgtgatgagttgaaaaccatgcgtattattaactactttgctgataatccgaaagat
aacccaattgtggttacacttggaacactctatactttttttcaagaattactagcttat
cacggacttacggatcaatctgaccaaaatgtggcaaaggttctcggtaaaaacccatat
tttgtgaaagaatatcacattgctgctcggaactatccaatgaaaactgtcagtggaatc
attgaaaagttgcgagaaattgatatgaaaagtaaaggagttggttcggtaaacatgtca
caatctgatttacttaaagagcttgtaatcaaaattttaagataa
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