Capnocytophaga sp. H4358: CGC49_07690
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Entry
CGC49_07690 CDS
T05519
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
caph
Capnocytophaga sp. H4358
Brite
KEGG Orthology (KO) [BR:
caph00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CGC49_07690 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caph03019
]
CGC49_07690 (rnc)
03009 Ribosome biogenesis [BR:
caph03009
]
CGC49_07690 (rnc)
03036 Chromosome and associated proteins [BR:
caph03036
]
CGC49_07690 (rnc)
Enzymes [BR:
caph01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CGC49_07690 (rnc)
Messenger RNA biogenesis [BR:
caph03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CGC49_07690 (rnc)
Ribosome biogenesis [BR:
caph03009
]
Eukaryotic type
90S particles
RNase
CGC49_07690 (rnc)
Prokaryotic type
rRNA processing factors
CGC49_07690 (rnc)
Chromosome and associated proteins [BR:
caph03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CGC49_07690 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
R3H_PUS7L
Mycovirus_RNAse
RM44_endonuclase
Skp1_POZ
DND1_DSRM
Cas3_I-F_Cas2
Motif
Other DBs
NCBI-ProteinID:
ATA73907
LinkDB
All DBs
Position
1800523..1801272
Genome browser
AA seq
249 aa
AA seq
DB search
MINLKKILSFTRFKKKKDGVFYAKMEALLGYPPKTLSFYSEAFTHPSYQYDKTKRKSYER
LEFLGDAILGAVIADYIFKNAPEQDEGYLTKMRSKIVERRYLNELGKEMRLLDFLRTKLP
PKQLGNNITGNLFEALIGAIYLDKGYGECMRFIERKLIKPYINIKNLEDKILSHKSLLIE
WCQKHKLTFSFDTDEDKEDRSGAKYFVSKIYVEGFSVTKARATSKKKAEENAAKRACYKI
QGKHKNLIQ
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
ttgataaatctaaaaaaaatattaagttttacccgttttaaaaagaaaaaagacggggtt
ttttatgccaaaatggaagcactgttaggctatcctccaaagacgttgtctttttatagc
gaagcttttacgcatccgtcttatcaatatgataaaaccaaacggaaaagctatgaacgt
ttggagtttttgggtgatgctattttgggagcagttatcgcagactatatttttaagaat
gcacctgaacaagatgaggggtatttgacaaaaatgcgatcaaaaatcgtagaacgtcgc
tatttgaatgaattaggtaaagaaatgcgattgttagattttttacgcacaaaattgccc
ccaaaacaattagggaacaatataacaggaaatttgtttgaagctcttataggagcaatc
tatctcgataaaggttacggtgagtgtatgagatttattgaaaggaaattgataaaacct
tacataaatattaaaaaccttgaagataagattcttagccataaaagtttactcattgaa
tggtgtcaaaaacacaaactcactttttcctttgatacagacgaagataaagaagaccgc
tcaggagcaaagtattttgtgtcaaaaatttatgtggaaggtttttctgtgactaaagca
agagccacttctaagaaaaaagcagaagaaaacgctgccaaacgagcgtgttacaaaatt
caaggaaaacacaagaacctaattcagtga
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