Capnocytophaga sp. H4358: CGC49_07775
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Entry
CGC49_07775 CDS
T05519
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
caph
Capnocytophaga sp. H4358
Pathway
caph03030
DNA replication
caph03410
Base excision repair
caph03420
Nucleotide excision repair
caph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGC49_07775
03410 Base excision repair
CGC49_07775
03420 Nucleotide excision repair
CGC49_07775
03440 Homologous recombination
CGC49_07775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caph03032
]
CGC49_07775
03400 DNA repair and recombination proteins [BR:
caph03400
]
CGC49_07775
Enzymes [BR:
caph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGC49_07775
DNA replication proteins [BR:
caph03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CGC49_07775
DNA repair and recombination proteins [BR:
caph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CGC49_07775
NER (nucleotide excision repair)
GGR (global genome repair) factors
CGC49_07775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
HHH
Pro-kuma_activ
NYN_YacP
DUF1198
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
ATA73178
UniProt:
A0AAC9YZV3
LinkDB
All DBs
Position
1813846..1816650
Genome browser
AA seq
934 aa
AA seq
DB search
MSKKRLFLLDAYALIFRGYYAFIKNPRINSKGLNTSAILGFMNSLFDVIKKERPDHLAVA
FDKGGSVDRLELFIDYKANRDETPEAIRIAVPYIQQILRALHIPIIEKEGYEADDIIGTL
AKQAEKQDYQVFMVTPDKDYAQLVSENIFVYRPARMGNDVEIWGVDQVREKFEVERPDQV
IDFLGMMGDAVDNIPGLPGVGEKTAKKLLADFGSMENLLANTDKLKGKLRENIEKNAEKG
LLSKKLATIILDVPVQFDETDFELSQPDMEAVTKIFEELEFRQLLQNLIKTYQTTAPATK
QIEAPSDLFSLQTAPVVVQGNLFATEHISERKNIQNTPHFYQLVDTPMACKILIQNILQQ
KEVCFDTETTNLDSLEAELVGIAFSWSAGKGYYVPFPENQQQTSKQLEIFRPFFENEHIT
KVGQNLKYDIKVLHNYGVEVKGLIFDTMIAHYLINPDMRHNMDVLAETYLNYTPVSIESL
IGKKGKNQLSMRQVSLHDQKEYAVEDADITWQLKEVFEEKLKSSKVDELYYNLEAPLIQV
LTKMELEGIRLDTDFLKELSAGLDDDIATLEKAIATEAGEEFNLASPKQLGDILFEKLKI
AKNPKKTKTGQYATSEEVLSAFADKHLIVSNILEWRQLQKLKSTYVDSLPNEVNPKTGRV
HTTYMQSVAATGRLSSNNPNLQNIPIRTERGQQVRKAFVPRDEQHVLLAADYSQIELRII
AALSEEQNMIQAFLNKEDIHRSTAAKVFNVPIEAVTREQRSHAKTVNFGIIYGVSAFGLS
NQTDLSRTESKELIETYYVTYPNLRAYINKQIFFAQQHGYVETVLGRRRYLPDIHSRNQV
VRGAAERNAINAPIQGSAADIIKIAMIRIQNRLEKEQFRTKMLLQVHDELVFDVPLDELE
AVKSAIQYEMENAFSLTVPLVVDLGVGKNWLEAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaaaagactatttctattagatgcttatgcgttgattttcagaggatattac
gcatttatcaaaaatccgcgtatcaattctaagggactcaacacctccgctattttaggg
tttatgaactcgttgtttgatgtcatcaaaaaagagcgtcctgaccatttggcggtggcg
tttgacaaaggagggagtgtagatcgtttggagttgttcatcgattacaaagcgaatcga
gatgaaacccccgaagccattcgcatagcagtgccttatattcaacagattttgagagct
ttgcacattcccatcatcgaaaaagaaggttatgaagccgatgatattattggaaccctt
gccaaacaagccgaaaaacaagattatcaggtgtttatggttactcccgataaagattat
gctcagttagtttctgagaatatattcgtatatcgccctgctcggatgggaaatgatgtc
gaaatttggggtgttgaccaagtaagagaaaaatttgaggtagaacgtccagatcaggtg
attgattttttaggaatgatgggagatgccgtcgataacataccaggattgcctggagtt
ggtgagaaaaccgcaaagaaacttcttgctgactttggtagtatggaaaacttactcgct
aataccgataaactcaaaggaaaactgcgtgaaaatatcgaaaaaaatgcagagaaagga
cttctttccaaaaaattagcaaccattattttggatgttccagtgcaatttgatgaaacc
gattttgaactgtcgcaacctgatatggaggctgttaccaaaatttttgaagagctcgaa
ttccgacaactgcttcagaatcttatcaaaacttaccagaccacagctccagcaacaaag
caaatcgaagctccgtctgatttattttctttgcaaacagcccctgtagttgtgcaaggt
aatttgtttgcaactgagcatatttctgaaagaaaaaacatacaaaacacaccacatttt
tatcagttggtagatactccaatggcatgtaaaattcttattcagaatatattacaacag
aaagaagtctgttttgacacagagaccacgaatcttgatagcttggaagctgaattggtt
ggtattgctttctcatggagtgcaggaaagggttattacgtacctttccctgagaatcaa
caacaaacgagcaaacaactcgaaatttttcgaccattctttgaaaatgagcatattacg
aaagtaggtcaaaatctgaaatatgatattaaagtattacacaattatggagtagaagtt
aaaggattgattttcgatactatgattgctcattatctcatcaatccagatatgaggcac
aatatggatgtattggcggaaacgtatttgaactatacccctgtctccatagaaagtctt
atcgggaaaaaaggtaagaatcagttgtcgatgcgtcaagtgtcgcttcatgaccaaaag
gaatatgctgttgaagatgctgacatcacatggcaacttaaggaagtttttgaagaaaag
ttgaaatcatcgaaggttgatgaattatattataatttggaagctcctttaattcaggtt
cttacgaaaatggaacttgaaggtattcgtttggatactgattttctcaaagagttatca
gcaggattggacgacgatatagctactttagaaaaagccattgctactgaagcaggggag
gagttcaatttggcatctcccaagcaattgggggatattctgttcgaaaaattgaaaatt
gctaaaaatcctaaaaagaccaaaacagggcaatatgccacttccgaagaggtactttca
gcatttgcagataaacatttgattgtttctaatatattagaatggaggcagttacagaaa
ttaaagtctacttatgtagatagtttacctaacgaggtaaatcccaaaacagggcgtgtc
catacaacctacatgcaaagcgttgcagctactggacgattgagtagtaataatccaaat
ttacaaaacatcccaattcgtactgaacgaggacagcaagtacgtaaggcatttgtacct
cgtgatgaacaacatgtactactcgctgcggattattcgcaaattgaattacggataatt
gctgcactaagtgaagagcaaaatatgattcaagcattcttaaacaaggaagatattcat
cgctccaccgcagctaaagtgtttaatgttcctattgaagccgttacacgcgaacaacgt
agccatgctaaaaccgtgaattttgggattatctatggagtttctgcctttggacttagc
aaccaaacggacctttcacgtaccgaaagtaaggaactcatagaaacttattatgttaca
tatccaaatttacgagcgtatatcaacaaacaaatattttttgctcagcaacatggctat
gttgagacagtgttgggacgaagacgctatttgccagatattcattcacgtaatcaggtg
gttagaggagctgctgagcggaacgccatcaatgctccaattcaaggaagtgccgccgat
attattaaaattgcgatgattcgtattcaaaaccgtttggaaaaagagcaatttcgaacc
aaaatgcttttgcaagtgcatgatgagttggtattcgatgttcccttagacgaactggaa
gccgttaaaagtgctatccaatacgaaatggaaaatgctttttcacttactgttcctttg
gtagtcgatttgggagtaggtaaaaattggttagaggctcattaa
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