Capnocytophaga sp. H4358: CGC49_08455
Help
Entry
CGC49_08455 CDS
T05519
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
caph
Capnocytophaga sp. H4358
Pathway
caph00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
caph00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CGC49_08455 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
caph01007
]
CGC49_08455 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caph03016
]
CGC49_08455 (lysS)
Enzymes [BR:
caph01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CGC49_08455 (lysS)
Amino acid related enzymes [BR:
caph01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CGC49_08455 (lysS)
Transfer RNA biogenesis [BR:
caph03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CGC49_08455 (lysS)
Prokaryotic type
Other AARSs
CGC49_08455 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
AlkZ-rel
Motif
Other DBs
NCBI-ProteinID:
ATA73301
UniProt:
A0AAC9Z138
LinkDB
All DBs
Position
1993372..1995069
Genome browser
AA seq
565 aa
AA seq
DB search
MQLSEQEIIRREKLDKLKELGINPYPAELYPVDTTSADVKSDFQEGKKVTLAGRLMSVRI
QGKASFASLQDSQGRVQLYINRDEICPDEDKTLYNEVFKKLLDLGDFIGVEGELFLTQVG
EKSVRVKNFKLLSKVLRPLPLPKTDADGNTFDAFTDPELRYRMRYVDLVVNPQVKEVFIK
RTKLFNAMRQFFNERGYMEVETPVLQSIPGGAAARPFITHHNSLDIPLYMRIANELYLKR
LIVGGFDGVYEFSKNFRNEGMDRTHNPEFTAMEIYVAYKDYHWMMEFTEQLLEHCAIAVN
GSTKATFGKHEIDFKAPYPRVTMTEAIQKFTGFDITGKTEKELFDFAKSIGIEVDDTMGK
GKLIDEIFGEKCEGNFIQPTFITDYPKEMSPLTKEHRNDPNLTERFELMVCGKEIANAYS
ELNDPIDQRERFEAQMALSERGDDEAMFIDQDFLRALEFGMPPTSGLGIGMDRLIMFLTN
NESIQEVLFFPQMKPEAKATQTVELNEDEKMVFEILQKAETLPLEELKTQSGLSNKKWDK
TIKGLTSKKVAFVEKQDDNLLVKLV
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcaactatcagaacaagagataattcgtagagaaaaacttgataaattaaaagaattg
ggtatcaatccgtatccagcggaattgtaccctgttgatacaacttctgccgatgtaaaa
tcggattttcaagaaggaaagaaggtaactttggcggggcgactaatgtctgtccgtatt
caaggaaaagcctcctttgcttcattacaagacagccaaggacgcgtacagctctatatc
aatcgtgatgaaatttgtcctgacgaagataaaactctttacaatgaagtgttcaaaaaa
ttgctcgatttgggcgatttcatcggtgtggaaggcgaacttttccttacacaagtgggc
gaaaaatcagtgcgggtaaaaaacttcaagctactgagcaaggtacttcgtccgttgccg
cttcctaaaaccgatgccgatggaaatacatttgacgcctttaccgaccccgagcttcgc
tatcgtatgcgttacgtggatttggtagtaaatccgcaggtgaaagaagttttcatcaag
cgtaccaaacttttcaatgcaatgcgtcaattttttaacgaacgtggttatatggaagtg
gaaacacctgttttacaatccattccaggaggagctgcggctcgtccgttcatcacacat
cataattctttggacattcctttgtatatgcgaattgccaacgaattgtatctgaaaaga
cttatcgtgggaggatttgacggcgtgtacgagttctcgaaaaacttccgaaacgaagga
atggacagaactcacaaccctgaatttaccgcaatggaaatttatgtggcgtacaaggac
taccattggatgatggagtttaccgaacaattgttggagcattgtgccatcgctgtaaat
ggttcaaccaaagccactttcggaaagcacgagattgattttaaagctccatatccgcga
gttacgatgaccgaagccattcaaaaattcacagggtttgacatcacaggaaaaactgaa
aaagaattgttcgattttgctaaatctattggaattgaggttgatgacacaatgggcaaa
ggcaaactaatagacgagattttcggcgagaaatgcgaaggaaatttcattcaacctaca
tttatcacggattatccgaaagagatgtcgccactgaccaaagaacatcgcaacgacccc
aatctgaccgagcgtttcgagctgatggtctgcggaaaagaaatcgccaatgcgtattcc
gagttgaatgaccctatcgaccaacgcgaacgtttcgaggcacagatggcactttccgag
cgaggcgatgacgaggcgatgttcatcgaccaagactttttacgagcgttagaatttggt
atgcctccaacatcaggcttgggaatcgggatggacagactcataatgttcctgaccaat
aacgaaagtatacaagaagtactttttttcccgcaaatgaagcctgaggcgaaagccaca
cagacagtagaattaaacgaagatgaaaaaatggtgtttgaaatcctccaaaaagcggaa
acacttccgttggaagagttaaaaacccaatcgggactatccaacaaaaaatgggataaa
accatcaaaggtctgaccagcaaaaaggtagctttcgttgaaaaacaagacgataattta
ttggtgaaattagtataa
DBGET
integrated database retrieval system
