Capnocytophaga sp. H4358: CGC49_09040
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Entry
CGC49_09040 CDS
T05519
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
caph
Capnocytophaga sp. H4358
Pathway
caph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CGC49_09040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caph03400
]
CGC49_09040
Enzymes [BR:
caph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CGC49_09040
DNA repair and recombination proteins [BR:
caph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CGC49_09040
RecFOR pathway proteins
CGC49_09040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
AAA_3
Mg_chelatase
TIP49
AAA_16
AAA_14
nSTAND3
AAA_33
AAA_PrkA
RNA_helicase
AAA_18
TsaE
Rad17
NACHT
AAA_28
Bac_DnaA
NB-ARC
AAA_24
AAA_17
Sigma54_activ_2
NPHP3_N
ABC_tran
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ATA73402
UniProt:
A0AAC9Z0I3
LinkDB
All DBs
Position
complement(2145560..2146582)
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AA seq
340 aa
AA seq
DB search
MNKNLNPNKENYSAQELDIERALRPLSFDDFAGQEAILENLTVFVKAANMRGEALDHTLF
HGPPGLGKTTLAHILANELGVGIKITSGPVLDKPGDLAGLLTNLQERDVLFIDEIHRLSP
IVEEYLYSAMEDYKIDIMIESGPNARTVQINLNPFTLVGATTRSGLLTAPMRARFGIQSR
LQYYTTELLADIVQRSASILKVPISTEAAIELASRSRGTPRIANALLRRIRDFAQIKGNG
KIDMEITRFGLKALNVDAHGLDEMDNKILATLIDKFKGGPVGITTLATAVSESPETIEEV
YEPFLIQEGFIVRTPRGREVTDLAYKHLGKVNPNVQGKLF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaatttgaatccaaataaagaaaactattcggctcaagagttggatattgaa
cgagctttacgtccgttgtcgtttgacgattttgcgggacaagaagctattttggagaat
cttactgtatttgtaaaagcagctaatatgcgaggagaggctcttgatcatactcttttt
cacggtcctcctggcttgggaaaaaccactttggctcatattttagctaatgagttgggt
gtgggcatcaaaattacttcagggcctgtactcgacaaaccaggtgatttggcaggactt
ctaacaaatttacaagaacgtgatgtgttgttcattgacgaaattcaccgattgagtccc
atagttgaggaatacctctattccgctatggaggattacaaaattgatataatgatagaa
tcagggcctaatgctcgaacagtacaaattaatttgaacccttttactttggtaggagca
accacacgttcgggattacttaccgctccgatgcgagctcgttttggtattcaaagccga
ttgcagtactacactaccgaactacttgctgacatcgtccaacgaagtgcttcgattttg
aaagtgcccatttcaacggaagctgctattgaattagcaagtcgaagtagaggaactcca
cgtattgccaatgcgttgctgcgtcgaatccgagattttgcccaaatcaaaggtaacgga
aaaattgatatggaaatcacccgctttggattaaaagctcttaatgttgatgctcatggt
ttggacgaaatggataataaaatacttgctactctaatagataagttcaaaggagggcct
gtaggtataactaccttagctacagctgtttcggaaagtcctgaaactatcgaagaggtt
tatgaaccattcctcattcaagagggattcatcgtgagaacacctcgtggtagagaggtt
accgatttggcatataaacatttaggtaaggtaaatccgaatgtacaaggaaaattattt
taa
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