Capnocytophaga sp. H4358: CGC49_09315
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Entry
CGC49_09315 CDS
T05519
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
caph
Capnocytophaga sp. H4358
Pathway
caph03030
DNA replication
caph03430
Mismatch repair
caph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGC49_09315
03430 Mismatch repair
CGC49_09315
03440 Homologous recombination
CGC49_09315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caph03032
]
CGC49_09315
03400 DNA repair and recombination proteins [BR:
caph03400
]
CGC49_09315
Enzymes [BR:
caph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGC49_09315
DNA replication proteins [BR:
caph03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CGC49_09315
DNA repair and recombination proteins [BR:
caph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CGC49_09315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
HHH_3
Intimin_C
DUF655
Motif
Other DBs
NCBI-ProteinID:
ATA73454
UniProt:
A0AAC9Z059
LinkDB
All DBs
Position
complement(2204491..2208966)
Genome browser
AA seq
1491 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPFTDTDNWPRAVQIAWQLHDRMGNLVEHQDFLIAPDDFNIPY
DAEIVHGISTELAQSKGVPIQVVFEKFNDALKKSQYVVGQNIGFDINIMGAEFLRYGVES
PLTTMPILDTCTEITAELCKIPGGRGGRFKLPTLTELHEFLFGIPFDEAHNATADVEATT
RCFFELIRIEQGFSKEFITPEYVSDFQKHNPTEIQPIGLKHINLKEASDKIRQSQKTEGG
LTEQQIEANIALLEDAPFAHLHNHTQFSVLQSTTSISDLVKKTAQEKMPAVALTDSGNMM
AAFHFVKEVAGYNKSAEAKNKQAIENGEQPTEITIKPIVGCEFNVCEDHLDKSHQDNGYQ
IVILAKNKKGYHNLAKMASIAYTQGYYYVPRIDKKIVEQYKSDLMVLSGGMNGEISSKVL
NIGQKQAEDALLWWKEQFREDFYIEIMRHGQEDENRVNITLIELAKKHHVKLIATNNTFY
INQKDANAHDILLCVKDNEKQATPIGRGRGYRFGMPNEEYYYKSTEEMKALFKDLPEAIL
NISEVISKVEPYGLGRDVLLPKFDIPAEFTVEDDPDGKKGENNYLRHLTYVGAEKKYKQG
ITDEIRERLDFELSIIEKTGYPGYFLIVQDFIAAARNMGVSVGPGRGSAAGSAVAYCLGI
TNMDPIEYDLLFERFLNPDRVSMPDIDIDFEDSGRQLVIDYVINKYGANQVARIITYGTM
AAKSSIKDTARVLAVPIEESNRLAGLVPDKMPSLKKIFNADDKTLKEKIRSEDFPKVNEL
KQLLEGDDLSSQTIQQARVLEGSVRNTGVHACGVIITPDDITNFVPISLAKDSDLFVTQF
DNSVVESAGLLKMDFLGLSTLTLIKDTVEIIKLRQGIDLDPEEFPLDDKKTYELFQRGET
VGIFQYESLGMQKYMKELKPTVFADLIAMNALYRPGPLEYIPSFIRRKHGTEPIVYDLEA
MEEYLKETYGITVYQEQVMLLSQKLAGFTKGDADTLRKAMGKKQKDVLDKMKPKFISQAA
ERGHNPEKLEKIWRDWEAFASYAFNKSHSTCYAWIGYQTAFLKANYPAEFMAAVLSNNMN
DIKQVTFFLEECKRMGIKVLSPDVNESFYKFTVNKNGDIRFGLGAIKGVGRNAVDTIVEH
RKEGMYTSIFDVAKRVDYKNINKKAFENIALAGGFDSFTKVHRAQYFHAEADGIPFLEKA
IRFGSKYQESKNSAQMSLFGGSSEVDVPEPIVPNCETWGNLEQLRREKEVIGIYISGHPL
DEFKHVIRQYCNLSLNQLSDLKSFVNREVNVAGMITDVKHNTAKNGKGWASFIMEDYDGA
YEFRLFNEDYLKFRNYLIPSTFLFCKFKVEEGWVKKDTNERGEPRIKFMEMIMMQDVLQK
MTKKVAFEFGVNDISEHTVHFFKENIAKFSGNCPVIYRIKSAEEKISISMDNPNQGVHIS
NEFLDALDKEKIRYLLNEREPKKLIDTKEDSKTVETEEEEEIHESLVDDND
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaattttcgatacggaaactacaggtttacctaaacgttgggacgctcccttt
acagataccgacaactggccacgtgctgtgcaaattgcatggcaattacacgaccgaatg
ggaaatctggtggaacatcaagattttttgattgctcctgatgattttaacattccgtac
gatgctgaaatagttcacggaatttccacagaactcgctcaaagtaaaggagttccaatt
caggttgtttttgaaaaattcaacgatgctctgaaaaaatctcagtatgtagtagggcaa
aacataggctttgatatcaacattatgggggcggaatttctacgttatggggtagaaagc
ccattgaccacaatgcctattttggatacgtgtactgaaattactgccgaactatgcaag
atccctggaggacgaggagggcgatttaaattacctaccctaacagaattacacgaattt
ttattcggaatcccctttgatgaagcccataacgcgacggccgacgtggaagccaccaca
cgctgtttctttgagttgattcgcatcgagcaaggattttcaaaagagtttattacgcca
gagtatgtttccgattttcaaaaacacaatcctactgaaattcaacctattgggcttaaa
cacatcaatttaaaagaggcctccgacaaaatccgtcaatctcaaaaaactgaaggtgga
cttactgagcaacagatagaagccaacatagctctactcgaagatgctccttttgcccat
ttgcacaaccatacgcaattctctgttttacaatctactacatccatctccgatttagta
aaaaaaaccgctcaggagaaaatgcccgccgtggctttgaccgatagcggaaatatgatg
gctgcttttcattttgtaaaagaagtggcaggatataacaaatcggcagaagctaaaaac
aaacaggccatcgaaaatggcgaacaacccactgaaattactataaaaccaattgtaggt
tgcgaatttaatgtatgtgaagaccatttggataaatcacaccaagataatggatatcaa
atagttatacttgcaaaaaacaaaaaaggctaccataacttagcaaaaatggcttccata
gcctacactcaaggatattactatgtacctcgaattgataagaaaatcgtagaacaatat
aagagcgatttgatggtactttcgggaggaatgaacggagagatctcgtccaaagtactg
aatatcggtcaaaaacaagctgaagatgctcttttgtggtggaaagaacaatttagggaa
gatttttacatcgaaatcatgcgacatggccaggaagatgaaaatcgcgtaaacataacg
cttatcgaactcgctaaaaagcaccatgtaaagctcattgcaactaataacaccttctat
atcaaccaaaaagatgcaaacgcacacgatattttgctatgtgtaaaagataatgaaaaa
caggcaactcctatcggtcgtgggcgtggttatcggtttgggatgcctaatgaggagtat
tattacaaatcgacggaggagatgaaagctttatttaaagatttacccgaagcgatttta
aatatttccgaagttatcagcaaggtggaaccctacggtttgggacgagatgttctacta
cctaaattcgatattcctgctgaatttacagtggaggacgaccccgatggaaagaaggga
gagaacaactatttgcgacatcttacatacgtaggtgcagaaaaaaaatacaagcaaggc
attacggacgaaattcgagaacgccttgattttgaattatctattatagaaaaaaccgga
tatccaggatattttcttattgtacaggacttcattgctgctgctcggaatatgggagta
tcggtagggccaggacgtggctcggcagcaggttctgctgtagcttactgcttaggaatt
accaacatggatccaattgaatacgacctcctctttgagcgttttctgaatcctgaccgt
gtgagtatgcctgatattgatattgattttgaagattcgggtcgccagcttgtaattgac
tatgtaataaataaatacggggcaaaccaagtagctcgaatcatcacctacggaacgatg
gccgctaaatcatctatcaaagatacggctcgtgttttagctgttcccattgaagaatca
aaccgactggctggtttagtacctgataaaatgccttcgctcaaaaagattttcaatgcc
gatgataaaaccttgaaagaaaaaatacgctccgaagacttccctaaggtcaacgaactt
aaacagttattagaaggcgatgatttgagtagccaaaccatccaacaggcaagagtttta
gaaggttcggtacgtaatacgggggttcatgcttgtggagttatcatcactccagatgat
attactaattttgtaccaatttcattagcaaaagattcggatttattcgttacccaattc
gataactcggtagtagagagtgcaggacttctgaaaatggactttttggggcttagtaca
ctcacccttatcaaagatacagtggaaatcattaaattacgtcaaggaattgaccttgat
cctgaggagtttccactggacgataaaaaaacttatgaacttttccaacgaggtgaaacc
gtcggtatttttcaatacgagtcccttggaatgcaaaaatacatgaaggagttgaagcct
actgttttcgctgatctcattgcgatgaatgctctctatcgacctggcccgttggagtat
atcccgagtttcattcgccgaaaacatggtacggaacctattgtgtatgaccttgaagct
atggaggaataccttaaagaaacgtacggaatcacagtgtatcaagagcaggtaatgctc
ctttctcagaaattagcaggatttaccaaaggtgatgcagacactctgcgtaaggcaatg
ggtaaaaaacagaaggacgtactggacaagatgaaacctaaattcatcagtcaggctgcc
gaaagaggacataaccccgaaaagttagaaaaaatttggagagattgggaagcctttgca
agttacgcctttaacaaatcacattccacatgttacgcttggattggctatcaaacagct
tttttgaaagctaactaccccgcagaatttatggcggccgtactatccaataacatgaat
gatatcaagcaagttactttctttttagaagaatgcaaacgaatgggaatcaaagtttta
agccctgatgtaaacgaatctttctataaatttacggtaaacaaaaacggagatattcgc
tttgggttaggagctatcaaaggagtaggaagaaatgccgtagacaccatagtggaacat
cgtaaagaaggaatgtacacatctatttttgatgtagcaaaacgcgttgattataaaaat
atcaataaaaaagcctttgagaatattgcacttgcaggaggttttgattcatttacgaaa
gtacatagagctcaatactttcacgccgaagctgatggaattccttttttggaaaaagca
atccgttttggaagtaagtaccaagaaagtaagaattctgctcagatgagtctattcgga
ggcagtagcgaagtagatgtccctgaacccatagttcccaactgcgaaacatggggtaat
ttggagcaactacgccgtgaaaaggaagttatcgggatttatatttcggggcaccctttg
gatgaatttaaacacgttattcggcaatattgcaacttatcactaaatcaactatctgat
ttaaaatcttttgtaaacagagaagtaaatgttgctggaatgattacggacgtgaaacac
aacactgctaaaaacggaaaaggttgggcttcattcatcatggaagactatgatggtgcg
tatgaatttcgtttattcaacgaagattatttaaaattccgtaactatttgatcccgtca
acatttctgttttgcaaattcaaagtagaagaaggctgggttaaaaaagataccaacgaa
cggggtgaaccacgcataaaattcatggaaatgattatgatgcaagatgttctacaaaag
atgacaaaaaaagtagctttcgaatttggcgtaaatgatatttcggaacatacagttcat
ttttttaaagagaatatagcaaaattttcaggaaactgccctgtcatctacaggataaaa
tctgccgaagaaaaaatatccattagcatggacaatccaaatcaaggtgtacatatttcg
aacgaatttttagatgccttagacaaggaaaaaatacgctatctactaaacgaacgagaa
cctaaaaaactcatcgacaccaaagaagattctaaaacggtagaaactgaagaggaggaa
gagattcatgaatcattagttgatgataatgattaa
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