Capnocytophaga sp. H4358: CGC49_10280
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Entry
CGC49_10280 CDS
T05519
Name
(GenBank) nuclease
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
caph
Capnocytophaga sp. H4358
Brite
KEGG Orthology (KO) [BR:
caph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caph03400
]
CGC49_10280
Enzymes [BR:
caph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CGC49_10280
DNA repair and recombination proteins [BR:
caph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CGC49_10280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ATA73626
LinkDB
All DBs
Position
2454423..2457164
Genome browser
AA seq
913 aa
AA seq
DB search
MFLKNVITDVLEQYAMVTERIIFVTSGKRPALFLKKYFAEQTTKVSIAPEFISIAELLQQ
ISGVQEVGNQQLLFELYETYRNTCQTTPDDFETFIGWGQTLLKDFSDIDHYLVQSEKIFP
YIHALKEAEHWSGFEKQTEMQQKYLDFWNTLGDYYFAFNEKLNDRNHGYAGFVAKKAVEK
LPKYIQENSHKIHIFVGFNALSKAEQQVVQSILMDTESEIYWDIDKYFMDNVHHDAGYFI
RKYKNNWRYYNQRKKEFKWLTSSYEESKNIEIIGVPKSVNQAHTVAGLLREIPHSNMERT
ALVIGDEHLLIPVLQSISSDIPVNVTMGYPLQQTPLNDLFVAFFRLHLSKSYRYKDVLHL
LTQPFLQEVFSGKGISKIIQHIKEKNLTYLSKAKLMEITPDEDKEIMEVLFPEKTDDYVT
DLINSALNIIYRIKNAVESDKNENILGLEYAYRFYQLFNQLQTLQGKYGYIDSVKTLYHF
YLDILQKSSLNFEGEPLEGLQVMGVLESRSLDFDNIIITSVNEGVMPMGKSGNSLIPYDV
KFHLEMPTYKDKDAIYSYNFYRMLQSAKNIYLIYDTENGSLKSKEKSRFILQLLSERNPN
HRIQYQVKAPEVYPAKGSMLQIPKTEAVFQRLREMADKGLSPSAITNYILNPRIFYQQNV
LQVYEERDVEETIEARTFGDIVHEVLETLYKPFLNTPLKQHHYIEMQSKLEALIEEKFVK
YYKNEDFKLGKNLLIFNVIHSYLKRFLDLEQQEVEKGTELVVLHLEEKIRVPFVSDKLPF
PVYIKGIIDRIDMRDGVLHIIDYKTGIVEENAVGIADWHLLVTDFKYSKAFQLLSYAYMY
QQRFGYQECMIVGNISFKRLNMGLIKFHTKEKVGRTYVKDYNINSFILDSYKEYTEALLA
EIFDISIPFTEKE
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgtttttaaaaaatgtaattactgatgttttggagcaatatgcaatggtgacagagcga
attattttcgtcacatctggtaagcgtccggcattatttctaaaaaaatattttgctgaa
caaaccacaaaggtctcaatagctccagaatttatcagtattgctgaattgttacagcaa
atttcaggagttcaagaggttggtaatcagcaacttttgtttgagctttatgaaacatac
cgaaatacctgtcaaacaactcccgatgattttgaaacctttatagggtggggacaaaca
ctattgaaagattttagtgatattgaccattatttggttcaatccgagaaaattttccca
tatattcacgctttgaaagaagcagaacattggtctggttttgaaaaacaaaccgaaatg
caacaaaaatatttggatttttggaatacacttggcgattattatttcgcttttaatgaa
aaattaaacgatagaaatcacggatatgcaggttttgttgcaaaaaaagcagtcgaaaaa
ttacctaaatacatacaagaaaacagccataaaatacatattttcgttggatttaatgct
ctttcaaaagcagaacagcaagtagtccaatccattttaatggataccgaatctgagata
tattgggacatagacaagtacttcatggataatgttcaccatgatgcaggatatttcatt
cgtaaatataagaacaactggaggtattataatcaaagaaagaaagagtttaaatggctc
actagcagttatgaagagtctaaaaatattgaaattataggagttcctaagagtgttaat
caggctcatacagtagctggattgctacgagaaatacctcacagtaatatggaacgaaca
gctttagtcattggagatgaacatttattaatccctgtactacagtctattagttcggat
attccagtgaacgtaacgatgggataccccttgcaacaaacaccgttgaatgatttgttt
gttgcttttttcaggctacacctatcgaaaagttaccgttacaaagatgtattacatcta
cttacacaaccatttcttcaagaagtgttttcaggcaaaggaatttctaaaattattcaa
catatcaaggaaaaaaatctgacatatttgtcgaaagcaaaattaatggaaatcactcct
gatgaagacaaggaaattatggaagttctttttccagagaaaaccgatgattatgttact
gatttgataaacagtgctttaaatataatatacagaattaagaacgctgtagaatctgat
aagaatgagaatatacttggtttggaatacgcctatcgtttttatcagttattcaatcag
ttacagactttacaagggaaatatggctatatagattctgtaaaaaccttgtatcatttc
tatttggacatattgcaaaaaagttccttaaattttgaaggagaaccattggaaggttta
caagtgatgggggtattggaaagtcgtagtttggatttcgataatattataataacatct
gtaaatgaaggggttatgccaatgggaaagagtgggaattccttaattccttatgacgta
aaatttcatttagagatgcctacctacaaagataaggatgctatttatagttataatttt
tatcgtatgttacagagtgccaaaaacatatatttaatttatgacactgaaaatggtagt
ttgaaaagtaaagaaaaaagccgatttatcctgcaattgttgtcagaaaggaatcctaac
cacaggattcaatatcaggtgaaggctcctgaggtgtatcccgcaaaaggttctatgtta
cagataccgaaaactgaagctgtttttcagcggttgagggaaatggctgataaagggtta
tctccttcagctataacaaattatatattaaacccacgaatattttaccaacaaaatgta
ctgcaagtttatgaagagcgtgatgtagaagaaactatcgaagctcgaacttttggggat
attgttcacgaagttttagaaacgctgtacaaaccttttttaaatacacctcttaaacag
catcattatattgaaatgcaatcgaaattggaggctctaatcgaagagaaattcgttaaa
tattacaaaaatgaagattttaaattaggtaaaaacttattgattttcaatgtaatacat
agttatttgaaacggtttttagatcttgaacagcaagaagttgagaaaggtaccgaattg
gttgttttgcatttggaagaaaaaatcagagtgccttttgtgagtgataaattacctttc
cctgtttatataaaaggaattattgaccgtattgatatgcgtgatggcgtgttgcatatt
attgattataagacaggtatagtagaagaaaacgctgtaggaattgctgattggcatttg
ctagtaactgatttcaagtatagcaaagcatttcagttattgagttatgcatacatgtat
cagcaacgttttggctatcaggaatgtatgattgtaggaaatatctcttttaagaggctc
aatatggggttgataaagttccatactaaagaaaaagtaggaagaacatatgtgaaagat
tataatataaactcttttatattagacagttacaaagaatatacagaagctttattagct
gagattttcgatatatcaattccttttacagaaaaagagtag
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