Capnocytophaga sp. H4358: CGC49_10870
Help
Entry
CGC49_10870 CDS
T05519
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
caph
Capnocytophaga sp. H4358
Pathway
caph00061
Fatty acid biosynthesis
caph00071
Fatty acid degradation
caph01100
Metabolic pathways
caph01212
Fatty acid metabolism
caph02024
Quorum sensing
caph04146
Peroxisome
Module
caph_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
caph00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CGC49_10870
00071 Fatty acid degradation
CGC49_10870
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CGC49_10870
09145 Cellular community - prokaryotes
02024 Quorum sensing
CGC49_10870
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
caph01004
]
CGC49_10870
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caph04147
]
CGC49_10870
Enzymes [BR:
caph01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CGC49_10870
Lipid biosynthesis proteins [BR:
caph01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CGC49_10870
Exosome [BR:
caph04147
]
Exosomal proteins
Exosomal proteins of breast milk
CGC49_10870
Exosomal proteins of breast cancer cells
CGC49_10870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ATA73956
LinkDB
All DBs
Position
2579976..2581769
Genome browser
AA seq
597 aa
AA seq
DB search
MNLLPYHYVSVFQENVKKYGSKKALGSKPDQNWTTISWQNFGELTEKVANALLSFQIKPQ
ETIGIFAQNMPQWTITDIGALFVRAVPVPIYATNTSEQALYVINHAEIKILFVGDQEQYD
KVLQVADKCPSLQKIVVFKENVALKESKFSMSWQDFLALGAEKKYQEELQKRIDDKKLSD
LFTIIYTSGTTGEPKGVMLDYENLAYQLIGHDNKLKLSNNDESLAFLPLSHVFERAWTYY
CLYKGATVYYLENTNNIKTALIEVKPTVMCAVPRFYEKIFATVHDMVAKSSFIKRGIFAF
AVKSGRKMFETKQRNQKPSWILQKSVQLSEKLVFAKFKKSLGGRIRFMPCGGANLEPSIG
RFFHSIGINVKLGYGMTETLATVSCWDDSSFNFKSVGSLMPNTEVKIGENNEILVKGGMV
MRGYYKNPEETEKAFTSDGFLKTGDAGNLDAENNVFITDRIKELMKTSNGKYIAPQHIEG
KIGKYNLIDQIAIIADGKKFVSALIVPNFEILTQMIEDLNVKYKNTSELIKNVQVLDFIN
RQIQRFQKDLPDYEQIKKFTLLPNSFSIEKNEITPTLKLKRKVIYVNYQREIEAMYK
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgaatttattaccgtatcactatgtttccgtatttcaagagaatgttaaaaaatacggt
tcaaaaaaagctttaggaagcaaacctgatcaaaattggacaaccatttcatggcaaaat
tttggagaattaaccgaaaaagtggcaaatgctttgctttctttccaaataaaaccacaa
gaaaccattgggatttttgcacaaaatatgcctcaatggacaattacagatattggagct
ttgtttgtcagagctgtccccgttcctatttatgctacaaatacttcagaacaagctctt
tatgttataaatcacgctgaaataaagatactcttcgtaggagatcaggaacaatacgac
aaagtcctacaggttgccgataagtgtccttcattgcaaaaaattgtagttttcaaagaa
aatgttgcgttgaaagaatcgaaattttcaatgtcatggcaagattttttagctttagga
gcagagaaaaaatatcaggaagagcttcaaaaacgtattgatgataaaaaattaagtgat
ttatttacaattatatacacttctggaacaactggagaacccaaaggagtaatgcttgac
tacgaaaatttggcttatcaattaattggacatgataacaaattaaaactctccaacaat
gatgaatcgttggcttttttgcctctgtctcatgtgtttgaaagagcgtggacatactat
tgtttgtataaaggtgcgacagtttattatttagaaaataccaataacattaaaactgcc
ctcatagaggttaaacctactgtaatgtgtgctgttccaaggttttatgaaaaaatattt
gccacagttcacgatatggtagcaaaatcatcgttcatcaaacgtggaattttcgccttt
gcagtgaaaagtggtcggaaaatgttcgaaaccaaacaacgcaatcaaaaaccttcgtgg
attctacaaaaatcggtgcaactatcagaaaagttagtttttgctaaatttaaaaaatcc
ttaggaggacgtatccgtttcatgccttgcggtggagcaaacttagaacctagcatcggt
cggtttttccattctatcggcattaatgtcaagttgggttacggaatgacggaaacctta
gctacggtttcgtgttgggatgactccagtttcaatttcaaatcggtaggaagtttaatg
ccaaatactgaggtgaaaatcggagaaaacaacgaaattttggttaaaggaggcatggtg
atgcgtggttactataaaaatccagaagaaactgaaaaagcctttacctcagatggattt
ttaaaaacgggcgatgcaggaaatttggatgctgaaaataatgttttcatcactgatcgc
atcaaggaattgatgaaaacttctaatgggaaatatattgctccccaacatattgaagga
aaaatcggtaagtacaatcttattgaccaaattgctatcattgcagacggtaaaaaattc
gtttctgcattgattgtacctaattttgagatacttacgcagatgattgaagatctgaat
gttaagtataaaaatacttctgaattaattaaaaatgtacaagtacttgattttataaat
agacaaatccagcgttttcaaaaagatttacctgattatgaacaaataaagaagtttaca
ttgcttccaaactctttttcgattgaaaaaaatgaaattacacctacgttgaaactcaaa
cgcaaagtaatttatgtgaattaccaacgtgagattgaagctatgtataaataa
DBGET
integrated database retrieval system
